BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20612 (UTR included)
(1711 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2B04 1328 0.0
BF14_2975_C1 155 3e-37
BF01044A2F08 121 4e-27
>BF01022A2B04
Length = 760
Score = 1328 bits (670), Expect = 0.0
Identities = 744/774 (96%), Gaps = 21/774 (2%)
Strand = Plus / Plus
Query: 401 ttttacaaaataaacaagcctggaattctataaataacgtaacgcgtacattcaacatat 460
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 8 ttttacaaaataaacaagcctggaattctataaataacggaacacgtacattcaacatat 67
Query: 461 acctctagtaataactaataagtaacaagtaattatcacaatgcgctacatattcctatc 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 acctctagtaataactaataagtaacaagtaattatcacaatgcgctacatattcctatc 127
Query: 521 cacaatattcagtatagtgttcgcttacgaaaaggacatgacttttacgatacaggcggg 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 cacaatattcagtatagtgttcgcttacgaaaaggacatgacttttacgatacaggcggg 187
Query: 581 aaaaatggaatgtttttatcaaaaagttgctctgggcgaagttattgacgtggagtatca 640
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 188 aaaaatggaatgtttttatcaaaaagttgctgtgggcgaagttattgacgtggagtatca 247
Query: 641 agtcatcgatgcttctcacggagagcttgatgtgtctttccagctggtggatcctatggg 700
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 248 agtcatcgatgcttctcacggggagctggatgtgtctttccagctggtggatcctatggg 307
Query: 701 acgtgggatcgtcacagattataagaagccggacaactctcatagacacacatcaacatt 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acgtgggatcgtcacagattataagaagccggacaactctcatagacacacatcaacatt 367
Query: 761 ggaaggcgattacagattctgtttcgacaacacattcagcactttcagcgagaaaacggt 820
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 368 ggaaggcgattacagattctgtttcgacaacaccttcagcactttcagcgagaaaac--- 424
Query: 821 agattgtggacaggtccaggtgttcttcgatttactgatagaaaatgacgagccccacct 880
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ------------------ggtgttcttcgatttactgatagaaaatgacgagccccacct 466
Query: 881 caacgactatgacgaggagaaggaactggaacttggtaattcagcggagtcctacatgat 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 caacgactatgacgaggagaaggaactggaacttggtaattcagcggagtcctacatgat 526
Query: 941 gcgagtcaaggacgtgttggagtcggtgtacaaggtccgggagcacgtgtccacagcaag 1000
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 527 gcgagtcaaggatgtgttggagtcggtgtacaaggtccgggagcacgtgtccaccgcaag 586
Query: 1001 gaggctgcaggaactgctctcagcccacgaggccagggacaggaacctcgcagaggatat 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 587 gaggctgcaggaactgctctcagcccacgaggccagggacaggaacctcgcagaggacat 646
Query: 1061 gtgtgacagagtcatgaactggtcgctcggccaaatgattctgatgctgatagttgggat 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gtgtgacagagtcatgaactggtcgctcggccaaatgattctgatgctgatagttgggat 706
Query: 1121 cactcaggtatacttcctcaagagcctgttcgaggatcccaccagtcgcggctt 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 cactcaggtatacttcctcaagagcctgttcgaggatcccaccagtcgcggctt 760
>BF14_2975_C1
Length = 761
Score = 155 bits (78), Expect = 3e-37
Identities = 87/90 (96%)
Strand = Plus / Minus
Query: 1 gcatcgcattagaactcggtccggacattttatttaaactagtattaaaagatttactaa 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 90 gcatcgcattagaactcggtccggacattttatttaaattagtattaaaagatttactac 31
Query: 61 aatgtaataaaagtttactaaattgtttac 90
|||||||| |||||||||||||||||||||
Sbjct: 30 aatgtaatcaaagtttactaaattgtttac 1
>BF01044A2F08
Length = 732
Score = 121 bits (61), Expect = 4e-27
Identities = 64/65 (98%)
Strand = Plus / Minus
Query: 1 gcatcgcattagaactcggtccggacattttatttaaactagtattaaaagatttactaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 65 gcatcgcattagaactcggtccggacattttatttaaattagtattaaaagatttactaa 6
Query: 61 aatgt 65
|||||
Sbjct: 5 aatgt 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,937
Number of extensions: 8794
Number of successful extensions: 8794
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8794
Number of HSP's successfully gapped: 4
Length of query: 1711
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1694
Effective length of database: 8,119,229
Effective search space: 13753973926
Effective search space used: 13753973926
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)