BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04721 (UTR included)
(1606 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A1E12 1649 0.0
BF14_1760_C1 283 4e-76
>BF01060A1E12
Length = 882
Score = 1649 bits (832), Expect = 0.0
Identities = 871/882 (98%), Gaps = 2/882 (0%)
Strand = Plus / Plus
Query: 564 gatgaaaatgttttcggctcgtatatatctggtattttggaaagtgaagatactatagat 623
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgaaactgttttcggctcgtatatatctggtattttggaaagtgaagatactatagat 60
Query: 624 gagaaaaaagacgccctggaagagttattgtcggaaattgtggacaaagatatatctgcg 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaaaaaagacgccctggaagagttattgtcggaaattgtggacaaagatatatctgcg 120
Query: 684 cacgttaatgaaattattgataaatgggaagtatgtaaacccaaggaagagtcaccgaag 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacgttaatgaaattattgataaatgggaagtatgtaaacccaaggaagagtcaccgaag 180
Query: 744 tctgctgctgatgttgacatccagctagcaaaattattggaatctcagtctttggctaca 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctgctgctgatgttgacatccagctagcaaaattattggaatctcagtctttggctaca 240
Query: 804 acgacccgacgtgaatataccgatgaagaaaaaaaaatacgtgaagctatactttctcag 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgacccgacgtgaatataccgatgaagaaaaaaaaatacgtgaagctatactttctcag 300
Query: 864 tacagccagttgcctgataatgaggaggatgaagagaacgattcggatacggaaggtcag 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacagccagttgcctgataatgaggaggatgaagagaacgattcggatacggaaggtcag 360
Query: 924 gatttggtaaagaataccaatgccttggatgtagctgctgcagcacgtgaaagaagggaa 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatttggtaaagaataccaatgccttggatgtagctgctgcagcacgtgaaagaagggaa 420
Query: 984 caagcacgtttagaagcccaaaggaagaaagataaggataaggaggatagagaaaagcaa 1043
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caagcacgtttagaagcccaacggaagaaagataaggataaggaggatagagaaaagcaa 480
Query: 1044 aaaacactaaaggaagagaaaaaggaaaagcgtaaaacacaaaaaggtgaaagaaagagg 1103
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaaacactaaaagaagagaaaaaggaaaagcgtaaaacacaaaaaggtgaaagaaagagg 540
Query: 1104 tagcaacttcaagattaaaaaaaaaaaa-cattta-gctgaataacataaattcatggat 1161
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 541 tagcaacttcaagattaaaaaaaaaaaaccatttaggctgaataacataaattcatggat 600
Query: 1162 gatatacaattttaaaaggagcgtatttgtgacatagtggctgaattttttgatattatt 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatatacaattttaaaaggagcgtatttgtgacatagtggctgaattttttgatattatt 660
Query: 1222 tttaagctatgtattatatagtcataaattatcagttttaaatgtcatggtaatagtatt 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttaagctatgtattatatagtcataaattatcagttttaaatgtcatggtaatagtatt 720
Query: 1282 tttgttccctttatatttatcaatttattttgattactaaatacattttagtgataagcg 1341
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 721 tttgttccctttatatttatcaatttattttgattactaaatacattttaatgataagcg 780
Query: 1342 ctttttgtttgttggaataatgattaataaggtatatgctaattctatctggttttgttt 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctttttgtttgttggaataatgattaataaggtatatgctaattctatctggttttgttt 840
Query: 1402 tatttaatactacaattggtaactcatactagtatttatgct 1443
|||||||||| |||||| || ||||||||| ||||||||||
Sbjct: 841 tatttaatacgacaattagtnnctcatactattatttatgct 882
>BF14_1760_C1
Length = 781
Score = 283 bits (143), Expect = 4e-76
Identities = 150/151 (99%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 1 tgcaacaaatgaccgtccggtgaaaacacagtaatagctctatcgtatcttgccgacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tgcaacaaatgaccgtccggtgaaaacacagtaatagctctatcgtatcttgccgacatt 91
Query: 61 tttcgagttgaagtaagttataataagaaatatattaaaatttgctttgtaatcgcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 tttcgagttgaagtaagttataataagaaatatattaaaatttgctttgtaatcgcttta 31
Query: 121 tgacttcggtatattgaaacagagtctaaca 151
||||||||||||| |||||||||||||||||
Sbjct: 30 tgacttcggtata-tgaaacagagtctaaca 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 278,999
Number of extensions: 18852
Number of successful extensions: 18852
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 18849
Number of HSP's successfully gapped: 2
Length of query: 1606
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1589
Effective length of database: 8,119,229
Effective search space: 12901454881
Effective search space used: 12901454881
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)