BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16284 (UTR included)
(4807 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009B2D05 993 0.0
>BF01009B2D05
Length = 796
Score = 993 bits (501), Expect = 0.0
Identities = 534/545 (97%)
Strand = Plus / Plus
Query: 1091 agatcctgaagcatcattgtttactgcattgcaacatgctttaagcaacagaccactaga 1150
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 252 agatcctgaagcatcattgtttactgcattccaatatgctttaagcaacagaccactaga 311
Query: 1151 acatactgtccttgaaaagattgatgagaaccctgaagaatctagccctgaggatgtgag 1210
| |||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 312 aaatactgtccttgaaaagattgaggagaaccctgaagaatctagtcccgaggacgtgag 371
Query: 1211 tgacaaagaaaaaactcctgatatatcgccagtgaccccagaggttgcgaaaagggggag 1270
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgacaaagaaaaaacgcctgatatatcgccagtgaccccagaggttgcgaaaagggggag 431
Query: 1271 ctggtcagaaaatgatcaattaagaagctccagacaggccaaaatgctatttaagacaag 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctggtcagaaaatgatcaattaagaagctccagacaggccaaaatgctatttaagacaag 491
Query: 1331 aaccctctcagcacttccattacaaaatgttaaaacgaaatctgccttcgaatctcgact 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aaccctctcagcacttccattacaaaatgttaaaacgaaatctgccttcgaatctcgact 551
Query: 1391 tctagcctcattcaaacagaggtccttggatgagaattatatacgaaataatttcaatga 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tctagcctcattcaaacagaggtccttggatgagaattatatacgaaataatttcaatga 611
Query: 1451 tgacgagaccgcgctatacttcaaacttctattttttggttgcttttgtatgttgatatg 1510
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 612 tgacgagaccgcgctatacttcaaacttctgttttttggttgcttttgtatgttgatatg 671
Query: 1511 gaaatacatatggctactgccagtcatgctgttcttcctagccatccacatcataaagat 1570
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaaatacatatggttactgccagtcatgctgttcttcctagccatccacatcataaagat 731
Query: 1571 atcgctcaacttctttggggtttggttattttttgagaatcaatgcaacaacctaacagc 1630
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 732 atcgctcaacttctttggggtttggttattttttgagaatcaatgcaacaacttaacagc 791
Query: 1631 taaaa 1635
|||||
Sbjct: 792 taaaa 796
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 501,753
Number of extensions: 9529
Number of successful extensions: 9529
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9529
Number of HSP's successfully gapped: 1
Length of query: 4807
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4789
Effective length of database: 8,109,745
Effective search space: 38837568805
Effective search space used: 38837568805
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)