BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02789 (UTR included)
(2152 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A2D06 672 0.0
BF01047A1C05 363 e-100
>BF01024A2D06
Length = 708
Score = 672 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Plus
Query: 812 gttgtggcgcctctacaacaatttagagtccaactctcctctccgttatcatgtgtacta 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gttgtggcgcctctacaacaatttagagtccaactctcctctccgttatcatgtgtacta 429
Query: 872 tcacgtcattgagctagctgcccgagtgggttctgtgggtgaggtgtttaagggggtgga 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tcacgtcattgagctagctgcccgagtgggttctgtgggtgaggtgtttaagggggtgga 489
Query: 932 acagctgaagagagagttcgccacatgcacaccatccaatgaacagatgcaaaaactcta 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 acagctgaagagagagttcgccacatgcacaccatccaatgaacagatgcaaaaactcta 549
Query: 992 taggttactccatcaagcgttactgggacagaacagcgagctggcagcgaaggtcatgat 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 taggttactccatcaagcgttactgggacagaacagcgagctggcagcgaaggtcatgat 609
Query: 1052 agaactgctcggtacttacaccgatgagaatgcctcatatgcccgggaggatgccattaa 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agaactgctcggtacttacaccgatgagaatgcctcatatgcccgggaggatgccattaa 669
Query: 1112 atgtatagtgacggccctcgccgaccccaacacctacct 1150
|||||||||||||||||||||||||||||||||||||||
Sbjct: 670 atgtatagtgacggccctcgccgaccccaacacctacct 708
Score = 440 bits (222), Expect = e-123
Identities = 222/222 (100%)
Strand = Plus / Plus
Query: 503 gcaaggcccagcagtttttatggacatatcgctagaagatcaggctttagaactcagaaa 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 gcaaggcccagcagtttttatggacatatcgctagaagatcaggctttagaactcagaaa 111
Query: 563 gtatttcaaaagcctcggtgctgaaatttctgaagaaaaatctcctaagggtattgaaga 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 gtatttcaaaagcctcggtgctgaaatttctgaagaaaaatctcctaagggtattgaaga 171
Query: 623 cgatcttcataaaatagtaggagtttgtgatgcatgttttaaagaaaacaatgaagctga 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 cgatcttcataaaatagtaggagtttgtgatgcatgttttaaagaaaacaatgaagctga 231
Query: 683 tattgaggccatactgaacagtatagtgtccatcatggtgtc 724
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tattgaggccatactgaacagtatagtgtccatcatggtgtc 273
>BF01047A1C05
Length = 442
Score = 363 bits (183), Expect = e-100
Identities = 225/239 (94%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 489 taacgattaaaaatgcaaggcccagcagtttttatggacatatcgctagaagatcag-gc 547
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 13 taacaattaaaaatgcaaggcccagcagtttttatggacatatcgctagaagatcagagc 72
Query: 548 tttagaactcagaaagtatttcaaaagcctcggtgctgaaatttctgaagaaaaatctcc 607
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 73 tttagaactcnnaaagtatttcaaaagccttggtgctgaaatttctgaagaaaaatctcc 132
Query: 608 taagggtattgaagacgatcttcataaaatagtaggagtttgtgatgcatgttttaaaga 667
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 taagggtgttgaagacgatcttcataaaatagtaggagtttgtgatgcatgttttaaaga 192
Query: 668 aaacaatgaagctgatattgaggccatactgaacag-tatagtgtccatcatggtgtcc 725
||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||
Sbjct: 193 aaataatgaagctgatattgaggccnnactgaacagcnannntgtccatcatggtgtcc 251
Score = 167 bits (84), Expect = 9e-41
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 812 gttgtggcgcctctacaacaatttagagtccaactctcctctccgttatcatgtgtacta 871
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gttgtggcgcctctacaacaagttagagtccaactctcctctccgttatcatgtgtacta 406
Query: 872 tcacgtcattgagctagctgcccgagtgggttctgt 907
||||||||| |||||| |||||||||||||||||||
Sbjct: 407 tcacgtcatagagctatctgcccgagtgggttctgt 442
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 279,990
Number of extensions: 5856
Number of successful extensions: 5856
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5854
Number of HSP's successfully gapped: 4
Length of query: 2152
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2135
Effective length of database: 8,119,229
Effective search space: 17334553915
Effective search space used: 17334553915
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)