BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01083 (UTR included)
(1591 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 668 0.0
BF01055B1E10 624 e-178
BF01049A2D11 151 4e-36
>BF14_729_C3
Length = 2041
Score = 668 bits (337), Expect = 0.0
Identities = 348/353 (98%)
Strand = Plus / Plus
Query: 423 atcggtacaagggttaaggaacacatctcagacatcaaaaacaggcgcgcgtcgaagtca 482
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 atcggtacaagagttaaggaacacatctcagacatcaaaaacaggcgcgcgtcgaagtca 1253
Query: 483 gcagtgtgtgaacacacaatggacaaaccaggccactacattcgttttgataaacctcaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 gcagtgtgtgaacacacaatggacaaaccaggccactacattcgttttgataaacctcaa 1313
Query: 543 atcctcgctcgggaagacaagtatataccgagattaattcgcgaggctattgaaattaaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 atcctcgctcgggaagacaagtatataccgagattaattcgcgaggctattgaaattaaa 1373
Query: 603 aaacatcccaatttcaatagagaagatggctggaatctatcaaacacctgggaccccgtt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 aaacatcccaatttcaatagagaagatggctggaatctatcaaacacctgggaccccgtt 1433
Query: 663 cttaaaaatataaaatcccatgtccgaaaccacaccgcaggacctcaagacaccgtgagc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 cttaaaaatataaaatcccatgtccgaaaccacaccgcaggacctcaagacaccgtgagc 1493
Query: 723 gcattctgccggcatccagagcggtacgccagaaaattaagaaatcgatggcg 775
||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1494 gcattctgccggcatccagagcggtacgccannnnattaagaaatcgatggcg 1546
>BF01055B1E10
Length = 796
Score = 624 bits (315), Expect = e-178
Identities = 318/319 (99%)
Strand = Plus / Plus
Query: 775 gcgatcccctggcgataatgcctctactggaccgcttccaggaagttatagcgaagtaca 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gcgatcccctggcgataatgcctctactggaccgcttccaggaagttatagcgaagtaca 353
Query: 835 gtagagacgaggagagtacggaacctatacccagacaacaagtgtccgaggtgtcgttcg 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gtagagacgaggagagtacggaacctatacccagacaacaagtgtccgaggtgtcgttcg 413
Query: 895 tcctgcgggcggtggcgtctctagccggtgctatgttgagggcgccgcgagggagggtcg 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 414 tcctgcgggcggtggcgtctctagccggtgctatgttgagggcgccgcgagggagagtcg 473
Query: 955 acgaggcggcctgggagaaacttatcggcgtgtatccgtcactcgtccgtctgtcaggcg 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 acgaggcggcctgggagaaacttatcggcgtgtatccgtcactcgtccgtctgtcaggcg 533
Query: 1015 gggcgcgggcgggggcggcgggggcagccctgagggaagccctgatgcagttcggagcgc 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gggcgcgggcgggggcggcgggggcagccctgagggaagccctgatgcagttcggagcgc 593
Query: 1075 tactggcgccgccctagcg 1093
|||||||||||||||||||
Sbjct: 594 tactggcgccgccctagcg 612
Score = 333 bits (168), Expect = 5e-91
Identities = 180/185 (97%)
Strand = Plus / Plus
Query: 1315 gtgtgcccagcatcgctaatgtgaaatgagtcttatcacgaggcggtaaggcgtggattc 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gtgtgcccagcatcgctaatgtgaaatgagtcttatcacgaggcggtaaggcgtggattc 671
Query: 1375 gtttagtcggccgaggctgtaatcgttctgtatataattttgtaaaatatataattttat 1434
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtttagtcggccgnnnctgtaatcgttctgtatataattttgtaaaatatataattttat 731
Query: 1435 cgattaaaatgtgtcatatttttacgttgaaacgaaagttgttacgcaataaatgtacta 1494
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 732 cgattaaaatgtgtcatatttttacgttgaaacgaaagttgttatgcagtaaatgtacta 791
Query: 1495 atgct 1499
|||||
Sbjct: 792 atgct 796
>BF01049A2D11
Length = 776
Score = 151 bits (76), Expect = 4e-36
Identities = 119/132 (90%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 423 atcggtacaagggttaaggaacacatctcagacatcaa-aaacaggcgcgcgtcgaagtc 481
|||| |||||||||||| |||||||||||||| |||| ||| ||| | | ||||||||
Sbjct: 644 atcgatacaagggttaaagaacacatctcagaaatcatgaaataggtgtacatcgaagtc 703
Query: 482 agcagtgtgtgaacacacaatggacaaaccaggccactacattcgttttgataaacctca 541
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 704 agcagtatgtgaacacacaatggacaaaccaggccactacattcggtttgataaaccaca 763
Query: 542 aatcctcgctcg 553
||||||||||||
Sbjct: 764 aatcctcgctcg 775
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,676
Number of extensions: 5777
Number of successful extensions: 5777
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5777
Number of HSP's successfully gapped: 4
Length of query: 1591
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1574
Effective length of database: 8,119,229
Effective search space: 12779666446
Effective search space used: 12779666446
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)