BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN12574 (UTR included)
         (4477 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01025A2A12                                                          398   e-110

>BF01025A2A12
          Length = 807

 Score =   bits (201), Expect = e-110
 Identities = 210/213 (98%)
 Strand = Plus / Plus

                                                                        
Query: 4265 aaaaaatattagtctgaactagattacatacaataatagatcctgtttattgaaacacaa 4324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    aaaaaatattagtctgaactagattacatacaataatagatcctgtttattgaaacacaa 61

                                                                        
Query: 4325 agcagatatttgaatgactcattgagaattagttttcacggttcgtctatgtggaaaagg 4384
            |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 62   agcagataattgaatgactcattgagaatttgttttcacggttcgtctgtgtggaaaagg 121

                                                                        
Query: 4385 gtagttgtaaatcaaatgcttcttgatctcaataattgttaatcggtgccggataaaata 4444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  gtagttgtaaatcaaatgcttcttgatctcaataattgttaatcggtgccggataaaata 181

                                             
Query: 4445 tttaacaaatcgatatttttttaattctctata 4477
            |||||||||||||||||||||||||||||||||
Sbjct: 182  tttaacaaatcgatatttttttaattctctata 214


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 508,239
Number of extensions: 10225
Number of successful extensions: 10225
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10225
Number of HSP's successfully gapped: 1
Length of query: 4477
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4459
Effective length of database: 8,109,745
Effective search space: 36161352955
Effective search space used: 36161352955
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)