BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10588 (UTR included)
(1450 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2H08 1106 0.0
>BF01056B2H08
Length = 827
Score = 1106 bits (558), Expect = 0.0
Identities = 582/590 (98%)
Strand = Plus / Plus
Query: 413 tacaatttacaaacagtaaatacatgtggttttaggttatcaaggcaaagtagacgttac 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacaatttacaaacagtaaatacatgtggttttaggttatcaaggcaaagtagacgttac 60
Query: 473 tttaaataaaatccaaaaatattttaaaatggtaaagaaaaaaattgataaccgtataag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttaaataaaatccaaaaatattttaaaatggtaaagaaaaaaattgataaccgtataag 120
Query: 533 agttttaatagaaaatggtgttaaacttggacatcggaccatgtttttacttgttggcga 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agttttaatagaaaatggtgttaaacttggacatcggaccatgtttttacttgttggcga 180
Query: 593 taaaagtagagatcaggtgccaatattgtatgatatgcttttaaaatcaacagtaaaatc 652
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 181 taaaagtagagatgaggtgccaatattgtatgatatgcttttaaaatcgacagtaaaatc 240
Query: 653 taggccgacagtattgtggtgttacaaaaataaagatgaggctataagcaatcatggacg 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taggccgacagtattgtggtgttacaaaaataaagatgaggctataagcaatcatggacg 300
Query: 713 taagagagctaagaagatcgcggcgggcaaattagaagtatcagaggagtgtttgtttga 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taagagagctaagaagatcgcggcgggcaaattagaagtatcagaggagtgtttgtttga 360
Query: 773 tgcgtttagagtagctacaacaattcatggccggtactattcagagagtcataccatgct 832
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcgttcagagtagctacaacaattcatggccggtactattcagagagtcataccatgct 420
Query: 833 tggtcagacatacggagtgtgtgtgctgcaggattttgaagctttaacaccaaatttgat 892
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggtcagacatatggagtatgtgtgctgcaggattttgaagctttaacaccaaatttgat 480
Query: 893 ggctcgtactatagaaacagttgaaggcggcggacttattatatttctgttgaaaaccat 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 481 ggctcgtactatagaaacagttgaaggcggcggacttattatatttctgttgaaaactat 540
Query: 953 gaattcattgagacagctgcactcaataacaatggatgttcattcaaggt 1002
||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 541 gaattcattgagacagctgcattcaataacaatggatgttcactcaaggt 590
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,418
Number of extensions: 4949
Number of successful extensions: 4949
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4949
Number of HSP's successfully gapped: 1
Length of query: 1450
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1433
Effective length of database: 8,119,229
Effective search space: 11634855157
Effective search space used: 11634855157
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)