BLASTN 2.2.24 [Aug-08-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DPGLEAN06040 (UTR included) (1771 letters) Database: est 9484 sequences; 8,280,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BF01057A1C04 1059 0.0 BF01016B1A11 149 2e-35 BF01018B2A11 127 7e-29 BF01030A2C06 105 2e-22 BF01056B1D01 100 1e-20
>BF01057A1C04 Length = 813 Score = 1059 bits (534), Expect = 0.0 Identities = 555/562 (98%) Strand = Plus / Plus Query: 356 cagaatatgtgtctatataaacatatgctcatcctggtttgatgtaaagtctcacaatga 415 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 cagaatatgtgtttatataaacatatgctcatcctggtttgatgtaaagtctcacaatga 311 Query: 416 ggttgtgaacactaaaacatttactaagttaaaagaggccatcggtgttgttggcctcca 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 ggttgtgaacactaaaacatttactaagttaaaagaggccatcggtgttgttggcctcca 371 Query: 476 tggcttggacaccctgtatggctacatgataaagaaccagctacagcatgttcagaatat 535 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 372 tggcttggacaccctgtatggctacatgataaagaatcagctacagcatgttcagaatat 431 Query: 536 atttagaagtcatccggaaagaaatgtagttagcacggatatgaaagatttcgaccagtt 595 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 432 atttagaagtcatccggaaagaaatgtaattagcacggatatgaaagatttcgaccagtt 491 Query: 596 tgtgctcaagggacagaagtcgtatcagcagttagcagacactgtcgtacagattggtac 655 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 492 tgtgctcaagggacagaagtcgtatcagcagttagcagacactgttgtacagattggtac 551 Query: 656 cttgcaactactgagaaaacatatagcgtatcaattgaacaccacttgtaaatttgattc 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 cttgcaactactgagaaaacatatagcgtatcaattgaacaccacttgtaaatttgattc 611 Query: 716 tgcacaattggaagcgtccttgagaactatgaacgaatcagttttaaacgaaatcaaaac 775 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 tgcacaattggaagcgtccttgagaactatgaacgaatcagttttaaacgaaatcaaaac 671 Query: 776 aggaagtaaatcaggttttaaaacagttcctttagctttgatgcaaaacttagaagagta 835 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 aggaagtaagtcaggttttaaaacagttcctttagctttgatgcaaaacttagaagagta 731 Query: 836 tctcagccggtgtggaatttcagaaccttttgataaaatatatctaaagaatgctaatga 895 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 732 cctcagccggtgtggaatttcggaaccttttgataaaatatatctaaagaatgctaatga 791 Query: 896 gttggtaaatattgatatggga 917 |||||||||||||||||||||| Sbjct: 792 gttggtaaatattgatatggga 813 >BF01016B1A11 Length = 786 Score = 149 bits (75), Expect = 2e-35 Identities = 123/139 (88%), Gaps = 5/139 (3%) Strand = Plus / Minus Query: 157 taaattactttttcaatcatttaaatcgggggtaccatttgaaagttatcac-----aag 211 ||||||||||||| ||||||||||||| || |||||||||||||||||||| ||| Sbjct: 166 taaattactttttaaatcatttaaatcaggcgtaccatttgaaagttatcattatataag 107 Query: 212 tttaatcatgctcaaaattaaataggctattttatattttttttaaagagctcgtgcgaa 271 |||| | || |||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 106 tttagtaattctcaaaattaaataggctattttatattttttctaaagtgcccgtgcgaa 47 Query: 272 gccggggctggttcctagt 290 |||||||||||| |||||| Sbjct: 46 gccggggctggtacctagt 28 Score = 67.9 bits (34), Expect = 5e-11 Identities = 40/42 (95%) Strand = Plus / Minus Query: 89 ttacataaatacggtactaagtcttatcaaaataaattactt 130 |||||||||||||| | ||||||||||||||||||||||||| Sbjct: 198 ttacataaatacggcattaagtcttatcaaaataaattactt 157 >BF01018B2A11 Length = 733 Score = 127 bits (64), Expect = 7e-29 Identities = 124/144 (86%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 110 tcttatcaaaataaattacttcgttttcaagcccacatcagtatctgtaaattacttttt 169 |||||| ||||| |||||||||||||||||||| |||||| | ||| ||||||||||||| Sbjct: 557 tcttatgaaaatgaattacttcgttttcaagcctacatcactttctttaaattacttttt 498 Query: 170 caatcatttaaatcgggggtaccatttgaaagttatc-----acaagtttaatcatgctc 224 |||||||||||||||| ||||| |||||||| |||| | || ||||| |||||| Sbjct: 497 aaatcatttaaatcgggcgtaccgtttgaaaggtatcataatataaatttaaaaatgctc 438 Query: 225 aaaattaaataggctattttatat 248 |||||||||||||| ||||||||| Sbjct: 437 aaaattaaataggccattttatat 414 >BF01030A2C06 Length = 599 Score = 105 bits (53), Expect = 2e-22 Identities = 112/131 (85%), Gaps = 8/131 (6%) Strand = Plus / Minus Query: 130 tcgttttcaagcccacatcagtatctgtaaattactttttcaatcatttaaatcgggggt 189 ||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||| || || Sbjct: 131 tcgtttttaagcctacatcactatctgtaaattactttttaaatcatttaaatcaggcgt 72 Query: 190 accatttgaaagttatc-----acaagtt---taatcatgctcaaaattaaataggctat 241 |||||||| |||||||| | ||||| |||| || |||||||||||| ||||||| Sbjct: 71 accatttgcaagttatcataatataagtttaataataatcctcaaaattaaaaaggctat 12 Query: 242 tttatattttt 252 ||||||||||| Sbjct: 11 tttatattttt 1 >BF01056B1D01 Length = 838 Score = 99.6 bits (50), Expect = 1e-20 Identities = 116/139 (83%), Gaps = 8/139 (5%) Strand = Plus / Minus Query: 130 tcgttttcaagcccacatcagtatctgtaaattactttttcaatcatttaaatcgggggt 189 ||||||| ||||| |||||| ||||||||||||||||||| |||||||||| || || || Sbjct: 449 tcgtttttaagcctacatcactatctgtaaattactttttaaatcatttaagtcaggcgt 390 Query: 190 accatttgaaagttatcacaagtt--------taatcatgctcaaaattaaataggctat 241 |||||||| ||||||||| || | |||| || |||||||||||| ||||||| Sbjct: 389 accatttgcaagttatcataatataagtctaataataattctcaaaattaaaaaggctat 330 Query: 242 tttatattttttttaaaga 260 |||||||||||| |||||| Sbjct: 329 tttatattttttgtaaaga 311 Score = 67.9 bits (34), Expect = 5e-11 Identities = 58/66 (87%) Strand = Plus / Minus Query: 20 gatggcatatgcctatctcttaaggataacatactttatccattttacaacttttaaaaa 79 ||||||||||| |||| ||||||||| ||||||| ||| |||||| ||| ||||||||| Sbjct: 597 gatggcatatgtctataccttaaggattacatactatatacattttccaagttttaaaaa 538 Query: 80 ttggca 85 |||||| Sbjct: 537 ttggca 532 Database: est Posted date: Jul 14, 2011 2:25 PM Number of letters in database: 8,280,457 Number of sequences in database: 9484 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 9484 Number of Hits to DB: 245,854 Number of extensions: 5245 Number of successful extensions: 5245 Number of sequences better than 1.0e-10: 5 Number of HSP's gapped: 5245 Number of HSP's successfully gapped: 8 Length of query: 1771 Length of database: 8,280,457 Length adjustment: 17 Effective length of query: 1754 Effective length of database: 8,119,229 Effective search space: 14241127666 Effective search space used: 14241127666 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 50 (99.1 bits) S1: 12 (24.3 bits) S2: 34 (67.9 bits)