BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10715 (UTR included)
(2917 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B1H03 1306 0.0
>BF01028B1H03
Length = 699
Score = 1306 bits (659), Expect = 0.0
Identities = 662/663 (99%)
Strand = Plus / Plus
Query: 549 aatatttttaaaaaggttgccacagaaggcggtagtgtcaaaaatttgctgtacgacgat 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatatttttaaaaaggttgccacagaaggcggtagtgtcaaaaatttgctgtacgacgat 60
Query: 609 aaattaaagcatttcagaactaatgtgctttacgcacttataacagagacaattaaacat 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaattaaagcatttcagaactaatgtgctttacgcacttataacagagacaattaaacat 120
Query: 669 gcgactgatattgataaaatatttgaaaattgtggtattttggcgaaagagcagcggcta 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgactgatattgataaaatatttgaaaattgtggtattttggcgaaagagcagcggcta 180
Query: 729 gatccttggcttgctaagattcttaccgcagagttgctttttggcaaaaaggctctgcct 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatccttggcttgctaagattcttaccgcagagttgctttttggcaaaaaggctctgcct 240
Query: 789 gggaaaagcaaacctgaactgacaatattatcatataaagaacagtttgagaactttagg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggaaaagcaaacctgaactgacaatattatcatataaagaacagtttgagaactttagg 300
Query: 849 agtgaaaatccagatgaagtgaaatctaaagttgttcacagaccgcggtacgtcaggata 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtgaaaatccagatgaagtgaaatctaaagttgttcacagaccgcggtacgtcaggata 360
Query: 909 aacacgaaccttttaaccacatcggatgctataagagcattccaagacgaaggctacaag 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aacacgaaccttttaaccacatcggatgctataagagcattccaagacgaaggctacaag 420
Query: 969 ttcataagatgtacatcagggtcctatgatgattacttgaagcagatccagggtttgacg 1028
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcataagatgtacatcaggatcctatgatgattacttgaagcagatccagggtttgacg 480
Query: 1029 gagtacgacttcactcaggactaccatgtgaaaaccatgtttgtgtttgcaccgggaacc 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagtacgacttcactcaggactaccatgtgaaaaccatgtttgtgtttgcaccgggaacc 540
Query: 1089 aagtttcacgaccatgatctgtacttgaataatcaaattattttgcaagataaggctaca 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagtttcacgaccatgatctgtacttgaataatcaaattattttgcaagataaggctaca 600
Query: 1149 gccctagccgtacacctgctcgccccgccatctggcagcactgtattagatatgtgtgct 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccctagccgtacacctgctcgccccgccatctggcagcactgtattagatatgtgtgct 660
Query: 1209 gct 1211
|||
Sbjct: 661 gct 663
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 410,450
Number of extensions: 9145
Number of successful extensions: 9145
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9145
Number of HSP's successfully gapped: 1
Length of query: 2917
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2899
Effective length of database: 8,109,745
Effective search space: 23510150755
Effective search space used: 23510150755
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)