BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14423 (UTR included)
(2299 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 151 6e-36
>BF14_729_C3
Length = 2041
Score = 151 bits (76), Expect = 6e-36
Identities = 118/131 (90%), Gaps = 2/131 (1%)
Strand = Plus / Plus
Query: 2171 aaatacttctttagctttccttgata--cttgtcattaggaatcctgactatacttaggg 2228
||||| |||||||||||||||||||| ||||| |||||||||||||| |||||| |||
Sbjct: 686 aaataattctttagctttccttgatatacttgttgttaggaatcctgacaatactttggg 745
Query: 2229 atatactgtttatgggaaacccacacatacggataggtatctcaatggtaactcacacca 2288
| ||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 746 acatactgtttataggaaacccacacatacggacaggtacctcaatggttactcacacca 805
Query: 2289 ctaccctatcc 2299
| |||||||||
Sbjct: 806 ccaccctatcc 816
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,831
Number of extensions: 6127
Number of successful extensions: 6127
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6126
Number of HSP's successfully gapped: 1
Length of query: 2299
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2282
Effective length of database: 8,119,229
Effective search space: 18528080578
Effective search space used: 18528080578
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)