BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN15278 (UTR included)
         (1942 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01052B2H04                                                          143   1e-33
BF01054B2B08                                                          109   2e-23
BF01057B1C11                                                           96   3e-19

>BF01052B2H04
          Length = 668

 Score =  143 bits (72), Expect = 1e-33
 Identities = 157/183 (85%), Gaps = 3/183 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1760 tggcaaacaagcagaccgccttcttggtgggcagtagccaccgtcgtccatggacatccg 1819
            |||||||| ||||||| |||| |||||||||||| ||| ||||||| ||||||||| |||
Sbjct: 175  tggcaaacgagcagacggcctacttggtgggcagcagctaccgtcgcccatggacacccg 234

                                                                        
Query: 1820 caacatccctgttgcggatgcgttgccaaccttggtttctttaggaatagggaggggtgg 1879
            || || | ||||||||||||||||||||| |||| ||| |  ||||||||||| ||||||
Sbjct: 235  ca-caactctgttgcggatgcgttgccaagcttgttttat--aggaatagggaagggtgg 291

                                                                        
Query: 1880 caaaaagaagatgacgggaaaaggtgggaatagggaaagggcaaccggctctctcgctca 1939
             || |||   ||| | |||||||||||||||||||||||||||||||| |||||  ||||
Sbjct: 292  gaataagggaatgtcaggaaaaggtgggaatagggaaagggcaaccggttctctgactca 351

               
Query: 1940 tcg 1942
            |||
Sbjct: 352  tcg 354


>BF01054B2B08
          Length = 807

 Score =  109 bits (55), Expect = 2e-23
 Identities = 98/111 (88%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1832 tgcggatgcgttgccaaccttggtttctttaggaatagggaggggtggcaaaaagaagat 1891
            |||||||||||||||||||||||||  ||||||||  ||||||||||| || ||  ||||
Sbjct: 807  tgcggatgcgttgccaaccttggttg-tttaggaagtgggaggggtgggaataaagagat 749

                                                               
Query: 1892 gacgggaaaaggtgggaatagggaaagggcaaccggctctctcgctcatcg 1942
            | | ||||| |||||||| |||||||||||||||||||||||| |||||||
Sbjct: 748  ggcaggaaagggtgggaacagggaaagggcaaccggctctctcactcatcg 698


>BF01057B1C11
          Length = 848

 Score = 95.6 bits (48), Expect = 3e-19
 Identities = 94/108 (87%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1763 caaacaagcagaccgccttcttggtgggcagtagccaccgtcgtccatggacatccgcaa 1822
            |||||||| |||| ||||   |||| |||||||||||| |||| ||||||| ||  ||||
Sbjct: 310  caaacaagaagacggcctagctggttggcagtagccactgtcgcccatggaaatttgcaa 251

                                                            
Query: 1823 catccctgttgcggatgcgttgccaaccttggtttctttaggaatagg 1870
            ||||  ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 250  catctatgttgcggatgcgttgccaaccttggttt-tttaggaatagg 204


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,371
Number of extensions: 8949
Number of successful extensions: 8949
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8944
Number of HSP's successfully gapped: 3
Length of query: 1942
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1925
Effective length of database: 8,119,229
Effective search space: 15629515825
Effective search space used: 15629515825
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)