BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09040 (UTR included)
(2917 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A2B06 1453 0.0
BF14_1427_C1 206 1e-52
>BF01013A2B06
Length = 753
Score = 1453 bits (733), Expect = 0.0
Identities = 748/753 (99%)
Strand = Plus / Plus
Query: 1393 ataccaatgaccgagatactagtagtgaccagagccaagatattatcaatagtgagatcc 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataccaatgaccgagatactagtagtgaccagagccaagatattatcaatagtgagatcc 60
Query: 1453 aacgagacatggaactaaacaaaaataatactgcaaaagaaatcgaagacaaaaatgcta 1512
|||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 aacgtgacatggaactaaacacaaataatactgcaaaagaaattgaagacaaaaatgcta 120
Query: 1513 tgaaaacaactagcgaggtgaaaaatagacaagatgaaaatacagatgaagagaagcctc 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaaacaactagcgaggtgaaaaatagacaagatgaaaatacagatgaagagaagcctc 180
Query: 1573 tggtagattatgaaagtgaaagctgcaagtcaaaaatgaatttagatatcacagaaacaa 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtagattatgaaagtgaaagctgcaagtcaaaaatgaatttagatatcacagaaacaa 240
Query: 1633 gtcaggaagatattaagactacacatgagaacgggaaaatgtataaaaaaaatgatgctg 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcaggaagatattaagactacacatgagaacgggaaaatgtataaaaaaaatgatgctg 300
Query: 1693 acaatactatcaacagaacaagtgagttaaataacttagaaaaaggagaagggacagagg 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaatactatcaacagaacaagtgagttaaataacttagaaaaaggagaagggacagagg 360
Query: 1753 aaaaaacggaaaacttggcatctcatgatgaaaaagatgtggtacaaaacacatcaaaag 1812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaaaacggaaaacttggcatctcatgatgaaaaagatgtggtacaaaacacatcaaaag 420
Query: 1813 gaaaggaaacaaaaaatgaaggtggtggtaactgtagcaatcctgttgatggtaattata 1872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaaggaaacaaaaaatgaaggtggtggtaactgtagcaatcctgttgatggtaattata 480
Query: 1873 cagacgctgctactgatgaagtaacaggggacagcaatcacaaaggatcagaaaaaagaa 1932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagacgctgctactgatgaagtaacaggggacagcaatcacaaaggatcagaaaaaagaa 540
Query: 1933 aactttccacagaagaaacaacagatagttcagtgagtaagaaaagtaaattaggagagg 1992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aactttccacagaagaaacaacagatagttcagtgagtaagaaaagtaaattaggagagg 600
Query: 1993 tgactgacaaaccatgcacttgtcctaaaaatgacaaaaaagtgtacagaggagcaacat 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgactgacaaaccatgcacttgtcctaaaaatgacaaaaaagtgtacagaggagcaacat 660
Query: 2053 tctggccctcaaccttccgccagagactctgcacatgcaatgaatgtctgagcatgtata 2112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tctggccctcaaccttccgccagagactctgcacatgcaatgaatgtctgagcatgtata 720
Query: 2113 aggacctgtctgttatgttccttatggacactg 2145
||||||| |||||||||||||| ||||||||||
Sbjct: 721 aggacctatctgttatgttcctaatggacactg 753
>BF14_1427_C1
Length = 837
Score = 206 bits (104), Expect = 1e-52
Identities = 104/104 (100%)
Strand = Plus / Minus
Query: 2814 gagacaattaagtttaataagtaataagagcatgatcacgcgtagaggatatcatagtgt 2873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gagacaattaagtttaataagtaataagagcatgatcacgcgtagaggatatcatagtgt 778
Query: 2874 ccaggccggtatagcaggtggaccagcggagacgagccctcggg 2917
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ccaggccggtatagcaggtggaccagcggagacgagccctcggg 734
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 432,905
Number of extensions: 20217
Number of successful extensions: 20217
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 20217
Number of HSP's successfully gapped: 2
Length of query: 2917
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2899
Effective length of database: 8,109,745
Effective search space: 23510150755
Effective search space used: 23510150755
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)