BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20533 (UTR included)
(1573 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2218_C1 1834 0.0
BF01054A1H02 80 1e-14
BF01038B1H07 78 5e-14
>BF14_2218_C1
Length = 1364
Score = 1834 bits (925), Expect = 0.0
Identities = 955/965 (98%)
Strand = Plus / Plus
Query: 97 tatattttaagttatttcaatattcttgtttaatttataattttatgacatagtgacctt 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tatattttaagttatttcaatattcttgtttaatttataattttatgacatagtgacctt 61
Query: 157 tggctatattgaaaagattttatctcggtgaatataatcgttttcttatcgtgttatcta 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tggctatattgaaaagattttatctcggtgaatataatcgttttcttatcgtgttatcta 121
Query: 217 ccctacatagccagatccgtttccttgaccgctcacgatgataagagcattagtttgaat 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccctacatagccagatccgtttccttgaccgctcacgatgataagagcattagtttgaat 181
Query: 277 tgatggtgcgtattatttaaaacggaatggctcttttagcatatattaatccattcatag 336
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgatggtgcgtattatttaaaacggaatggctcttttagcatatattaatccattcataa 241
Query: 337 cgtatcgcgatttagtacgtcgtccaatcgagagttttgtcagcgaacagtacactagtt 396
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 242 cgtatcgcgatttagtacgtcgaccaatcgagagttttgtcagcgaacagtacactagtt 301
Query: 397 acaaaaagaaaactagcgatggtataacaagtgtgaaggagcttttatatagagctggtg 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acaaaaagaaaactagcgatggtataacaagtgtgaaggagcttttatatagagctggtg 361
Query: 457 ttttgtcagtgtttttatcggctatattatggatatccatatttatgtatattgtgtttt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 362 ttttgtcagtgtttttatcggctatattatggatatccatatttatgtatattgtctttt 421
Query: 517 actatacatatatgccaaatgtgacacacgtacgacctgtgcatcttcagttcaaatcct 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 actatacatatatgccaaatgtgacacacgtacgacctgtgcatcttcagttcaaatcct 481
Query: 577 gcgatgaaaacatgggagtgtgctcgttcccctcagcccatgtccagttgacccgtcgga 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gcgatgaaaacatgggagtgtgctcgttcccctcagcccatgtccagttgacccgtcgga 541
Query: 637 atcaagtgttgatgtcctcacaaccgtataaagtacgtcttgttatggatgtgccggaaa 696
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 542 atcaagtgttgatgtcgtcacaaccgtataaagtacgtcttgttatggatgtgccagaaa 601
Query: 697 cacagattaataaggacttaggtatgttcatggtgtgcgctcaaatgagagcttctggtg 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cacagattaataaggacttaggtatgttcatggtgtgcgctcaaatgagagcttctggtg 661
Query: 757 gcgcgctggtgtcatcgtcctgtcgctcggcgatgttgaaacacagatcgaaattgcacc 816
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 662 gcgcgctggtgtcatcgtcctgtcgctcggcgatgttgaaacacagaacaaaattgcacc 721
Query: 817 acgtgttacgtgttctggctttcgctccactattgttatcaggtgtcaatgaggagaagc 876
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 acgtgttacgtgttctggccttcgctccactattgttatcaggtgtcaatgaggagaagc 781
Query: 877 aaacgattcaggttgagcttttcagcgactttgaagacgatcagtcacacccggtgacgg 936
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 782 aaacgattcaggttgagcttttcagcgactttgaagacgatcagtcacatccggtgacgg 841
Query: 937 acgcgtacgttgagctccagtcgcgatacatccaagtgctgtcttgtgagttacatatag 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 acgcgtacgttgagctccagtcgcgatacatccaagtgctgtcttgtgagttacatatag 901
Query: 997 aagctcacttcacagggctgagatacgtcatgtactactggccgaaagtatcggctctca 1056
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 aagctcacttcacaggactgagatacgtcatgtactactggccgaaagtatcggctctca 961
Query: 1057 ttggt 1061
|||||
Sbjct: 962 ttggt 966
>BF01054A1H02
Length = 850
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1172 agcgttaaaggtttaacgcaaccttgttggaagtcgcataagtagtttcacttcaa 1227
||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||
Sbjct: 257 agcgttaaacgtttagcgcaaccatgttggaagtcgcataagaagtttcacttcaa 312
>BF01038B1H07
Length = 768
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 1172 agcgttaaaggtttaacgcaaccttgttggaagtcgcataagtagtttcacttcaaaaat 1231
|||||| || ||||||||||||||||||| | ||||||| || |||||||||||||||||
Sbjct: 595 agcgttgaacgtttaacgcaaccttgttgaatgtcgcattagaagtttcacttcaaaaat 536
Query: 1232 tat 1234
|||
Sbjct: 535 tat 533
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 219,594
Number of extensions: 5241
Number of successful extensions: 5241
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5241
Number of HSP's successfully gapped: 3
Length of query: 1573
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1556
Effective length of database: 8,119,229
Effective search space: 12633520324
Effective search space used: 12633520324
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)