BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02971 (UTR included)
(1600 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_381_C1 1080 0.0
>BF14_381_C1
Length = 1267
Score = 1080 bits (545), Expect = 0.0
Identities = 560/565 (99%)
Strand = Plus / Plus
Query: 872 gggaaactacgaaagcataatccaatatccatacaaacttggacgaccatgtggagattg 931
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 703 gggaaactacgaaagcataatccaatatccatacaaacttggacgaccatgcggagattg 762
Query: 932 tcccggccagtgcgtatctggttacctttgctccaactcctgtcctgtcaaagactttta 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tcccggccagtgcgtatctggttacctttgctccaactcctgtcctgtcaaagactttta 822
Query: 992 ctcaaactgcgagtcccttcagaaatacaccgacgtatgcgaacgtggggtttgcaatgc 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 ctcaaactgcgagtcccttcagaaatacaccgacgtatgcgaacgtggggtttgcaatgc 882
Query: 1052 aacttgcggttgtggcgatcaacgtttacataagaaccatccgtggtaattagttatagc 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 aacttgcggttgtggcgatcaacgtttacataagaaccatccgtggtaattagttatagc 942
Query: 1112 tagttattatatctcaattctacttgtaatgcgaatattacaaatgaggtgcctttgatg 1171
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 943 tagttattatatctcaattctacttgtaatgcgaatattacaaatgaggtacttttgatg 1002
Query: 1172 tgtagtgtattatttattaaatattattagatatgtaagtataattttgaataaacatta 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 tgtagtgtattatttattaaatattattagatatgtaagtataattttgaataaacatta 1062
Query: 1232 aataaacttgaaataaacaaaaaaatatatatatttatttcacaaatatttctgttaatt 1291
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1063 aataaacttgaaataaacaaaaatatatatatatttatttcacaaatatttctgttaatt 1122
Query: 1292 actacattattcctttttatctcccaatttttgtgtgtaacgtatttattataacattat 1351
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1123 actacattattcctttttatctcccaatttttgtgtataacgtatttattataacattat 1182
Query: 1352 tttgtccgatgttaagacatttttaaagcaaatctcggagaattgaagttcaattttatt 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 tttgtccgatgttaagacatttttaaagcaaatctcggagaattgaagttcaattttatt 1242
Query: 1412 ctaataatatagttctttagactgt 1436
|||||||||||||||||||||||||
Sbjct: 1243 ctaataatatagttctttagactgt 1267
Score = 765 bits (386), Expect = 0.0
Identities = 389/390 (99%)
Strand = Plus / Plus
Query: 483 gattcaaacaatttcaatatgcttaccggaacagttcatgtacttcaagttttgttagcg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gattcaaacaatttcaatatgcttaccggaacagttcatgtacttcaagttttgttagcg 178
Query: 543 tcttatttaattttacaattacaaagtgcgttgccttggagcgatagacagctttaccca 602
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 179 tcttatttaattttacaattacaaagcgcgttgccttggagcgatagacagctttaccca 238
Query: 603 tcaacaaaaattcctgacaacgctctgagtccaagaagattagttgtaagacggaaaatt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tcaacaaaaattcctgacaacgctctgagtccaagaagattagttgtaagacggaaaatt 298
Query: 663 gtactttaccacaactttttccgtacaaaagttcgcccaactgcttctaatatgctttta 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gtactttaccacaactttttccgtacaaaagttcgcccaactgcttctaatatgctttta 358
Query: 723 atgtcgtggcattcgttggccgctaagcaagctcagatatatgcagataagtgcatattc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 atgtcgtggcattcgttggccgctaagcaagctcagatatatgcagataagtgcatattc 418
Query: 783 ctacaacacaacgatcctagggagaacactgtgccgtatcttggaagctgcgggcaaaat 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctacaacacaacgatcctagggagaacactgtgccgtatcttggaagctgcgggcaaaat 478
Query: 843 ctttttgtgtcatcacataaaactccttgg 872
||||||||||||||||||||||||||||||
Sbjct: 479 ctttttgtgtcatcacataaaactccttgg 508
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,494
Number of extensions: 6563
Number of successful extensions: 6563
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6562
Number of HSP's successfully gapped: 2
Length of query: 1600
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1583
Effective length of database: 8,119,229
Effective search space: 12852739507
Effective search space used: 12852739507
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)