BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20567 (UTR included)
(1810 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2487_C1 1451 0.0
>BF14_2487_C1
Length = 752
Score = 1451 bits (732), Expect = 0.0
Identities = 747/752 (99%)
Strand = Plus / Plus
Query: 679 taacactactcgtttataagaacgggaagcgagtatactatccacacgacccacctcctt 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taacactactcgtttataagaacgggaagcgagtatactatccacacgacccacctcctt 60
Query: 739 atatagacggaatacgtatcaacagtccccactacctcgtgaagataatagtgggggaga 798
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatagacggtatacgtatcaacagtccccactacctcgtgaagataatagtgggggaga 120
Query: 799 acagttcggacaaatacacactggtcgtgtcccagtatgagaagactcgcaccatatact 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acagttcggacaaatacacactggtcgtgtcccagtatgagaagactcgcaccatatact 180
Query: 859 acacgctgagggcctacgccacgtgtccgttcgcattggcaaagctggacccatatccct 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acacgctgagggcctacgccacgtgtccgttcgcattggcaaagctggacccatatccct 240
Query: 919 ataccaaaactatcagaggtgaatggtcgggcagaacagccggcggttgtgaaaatcaca 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataccaaaactatcagaggtgaatggtcgggcagaacagccggcggttgtgaaaatcaca 300
Query: 979 gacaaacttatcagaataacccaaaatatataataacggtcccagaaagcaggaacccgt 1038
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacaaacgtatcagaataacccaaaatatataataacggtcccagaaagcaggaacccgt 360
Query: 1039 gccacgtcaccatagaactgaaaggtcccaaagaataccagataggagtagacgcgaggg 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gccacgtcaccatagaactgaaaggtcccaaagaataccagataggagtagacgcgaggg 420
Query: 1099 ttgaatccttggacgatccaaatataaccgcgccgttcttgagggaatcctcaggagcgt 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgaatccttggacgatccaaatataaccgcgccgttcttgagggaatcctcaggagcgt 480
Query: 1159 acagatctggtttcgttgtgctggagttaaataatttaccaggcggacggtatctgctca 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acagatctggtttcgttgtgctggagttaaataatttaccaggcggacggtatctgctca 540
Query: 1219 caccatctaccttctatccgggacaggaagggccatttttccttgaactgagatctactt 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caccatctaccttctatccgggacaggaagggccatttttccttgaactgagatctactt 600
Query: 1279 gcagcatcacagccgagaggaagaatgaatgatctgacaaatgaatgattgaatgaatga 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcagcatcacagccgagaggaagaatgaatgatctgacaaatgaatgattgaatgaatga 660
Query: 1339 acggaatagatagtaaggtgtacaccgcacaggcgatcagcagggttaagctttttaata 1398
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acggaatagatagtaaggttaacaccgcacaggcgatcagcagggttaagctttttaata 720
Query: 1399 atgtagtttgtagtttatctgaaatgtgttac 1430
| ||||||||||||||||||||||||||||||
Sbjct: 721 acgtagtttgtagtttatctgaaatgtgttac 752
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 189,659
Number of extensions: 3363
Number of successful extensions: 3363
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3363
Number of HSP's successfully gapped: 1
Length of query: 1810
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1793
Effective length of database: 8,119,229
Effective search space: 14557777597
Effective search space used: 14557777597
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)