BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05552 (UTR included)
(1825 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2D10 1057 0.0
BF01049B2H03 101 4e-21
BF01058A1C03 94 9e-19
BF14_729_C3 82 4e-15
BF14_3184_C1 74 9e-13
BF01061B1E05 68 5e-11
>BF01056B2D10
Length = 575
Score = 1057 bits (533), Expect = 0.0
Identities = 561/567 (98%), Gaps = 3/567 (0%)
Strand = Plus / Plus
Query: 443 atatttattgttttttttttt-gcgaaacgtgcaatatatcttacagtaagataaaaata 501
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 10 atatttattgttttttttttttgcgaaacgtgca-tatatcttacagtaagataaaaata 68
Query: 502 tggccc-tcccgacagcacaaccggctgaagttttacgagcatggcagaaagatgatctt 560
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tggcnnntcccgacagcacaaccggctgaagttttacgagcatggcagaaagatgatctt 128
Query: 561 tatgaaaaacaactggctggttcattagcacgacttgtcccttcacatcatgcttcaaag 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tatgaaaaacaactggctggttcattagcacgacttgtcccttcacatcatgcttcaaag 188
Query: 621 gcagttccagtatcatccgtactgtataaaactttcacaactcttaaagacttgcaaacg 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gcagttccagtatcatccgtactgtataaaactttcacaactcttaaagacttgcaaacg 248
Query: 681 ctgggtgaggaatattctggtatcgtacaggtcgacgattccttccacaaattgcctagt 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctgggtgaggaatattctggtatcgtacaggtcgacgattccttccacaaattgcctagt 308
Query: 741 tttatgtcccgactctccagcatcttgctatctgcttttggtgaaaatttaacgagaaaa 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tttatgtcccgactctccagcatcttgctatctgcttttggtgaaaatttaacgagaaaa 368
Query: 801 atacttaatcatcttggtaaacaggtggaaagtaatgcatatctgaaacctaaggcacag 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atacttaatcatcttggtaaacaggtggaaagtaatgcatatctgaaacctaaggcacag 428
Query: 861 aacttcctgatggtgatattaaagtcattgaataatattgtgccacaaatagagaccatt 920
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 429 aacttcctgatggtgatattaaaatcattgaataatattgtgccacaaatagagaccatt 488
Query: 921 catcgcgccctgtcgtatatcaatggtggaccaattcagataagcaaaactgtcacaggt 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 catcgcgccctgtcgtatatcaatggtggaccaattcagataagcaaaactgtcacaggt 548
Query: 981 ataaattatgtccatgttagaccagcc 1007
|||||||||||||||||||||||||||
Sbjct: 549 ataaattatgtccatgttagaccagcc 575
>BF01049B2H03
Length = 832
Score = 101 bits (51), Expect = 4e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 81 taataaaatacacttagtaatccgaaaaatactagtttcattaaaatgaatactcgcgaa 140
||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| ||
Sbjct: 278 taataaaatacgcttagtaatccgaaaaatattagtttcatttaaatgaatactcgctaa 337
Query: 141 agtcttagattttattata 159
| |||||||| | ||||||
Sbjct: 338 aatcttagatctcattata 356
>BF01058A1C03
Length = 779
Score = 93.7 bits (47), Expect = 9e-19
Identities = 70/75 (93%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 67 tgtagttttaaaaataataaaata-cacttagtaatccgaaaaatactagtttcattaaa 125
|||||||||||||||||||||||| ||||| |||||||||||| || |||||||||| ||
Sbjct: 450 tgtagttttaaaaataataaaatagcactttgtaatccgaaaa-tattagtttcatttaa 508
Query: 126 atgaatactcgcgaa 140
|||||||||||||||
Sbjct: 509 atgaatactcgcgaa 523
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 4e-15
Identities = 91/105 (86%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 47 taaccgatacgtcggaagtttgtagttttaaaaataataaaatacacttagta-atccga 105
||||||| ||||||| | | ||||||||| ||| ||||||||| | | ||||| ||||||
Sbjct: 1621 taaccgaaacgtcgggattatgtagtttttaaa-taataaaatccgcgtagtatatccga 1679
Query: 106 aaaatactagtttcattaaaatgaatactcgcgaaagtcttagat 150
| |||||||| |||||| |||||||||||||||||| ||||||||
Sbjct: 1680 ataatactagcttcatttaaatgaatactcgcgaaaatcttagat 1724
>BF14_3184_C1
Length = 1256
Score = 73.8 bits (37), Expect = 9e-13
Identities = 68/78 (87%), Gaps = 4/78 (5%)
Strand = Plus / Minus
Query: 77 aaaataataaaatacacttagtaatccgaaaaatac----tagtttcattaaaatgaata 132
|||||| |||||||| ||||| |||||||||||||| |||||||||| |||||| ||
Sbjct: 92 aaaatactaaaatacgcttagcaatccgaaaaatacctattagtttcatttaaatgagta 33
Query: 133 ctcgcgaaagtcttagat 150
||||||||| ||||||||
Sbjct: 32 ctcgcgaaaatcttagat 15
>BF01061B1E05
Length = 745
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 109 atactagtttcattaaaatgaatactcgcgaaagtcttagat 150
|||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 9 atactagtttcatttaaatgaatactcgcgaaaatcttagat 50
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 320,973
Number of extensions: 7914
Number of successful extensions: 7914
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 7907
Number of HSP's successfully gapped: 6
Length of query: 1825
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1808
Effective length of database: 8,119,229
Effective search space: 14679566032
Effective search space used: 14679566032
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)