BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18135 (UTR included)
(2917 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1B01 1160 0.0
BF01025A2C03 803 0.0
>BF01023B1B01
Length = 800
Score = 1160 bits (585), Expect = 0.0
Identities = 603/609 (99%)
Strand = Plus / Plus
Query: 535 gcttctccaggaagaagagggagagaaggaaatccctggagccatcgtcgatcagcgctg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gcttctccaggaagaagagggagagaaggaaatccctggagccatcgtcgatcagcgctg 71
Query: 595 ggaatagtcctttgaaaagtaactccaagtccaaactgtctcggccatcaagtcagaatg 654
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 72 ggaatagtcctttaaaaagtaactccaagtccaaactgtctcggccatctagtcagaatg 131
Query: 655 ctatcgcgcctagaacttctgcgtatgaggagaagaggaaggcaaaactgaaggaatggg 714
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ctatcgcgccaagaacttctgcgtatgaggagaagaggaaggcaaaactgaaggaatggg 191
Query: 715 agtgtggtatatgcaagagcgagctggtggaacccagactactcgcgtgtcttcatagtt 774
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 192 agtgtggtatatgcaagagcgagctggttgaacccagactactcgcgtgtcttcatagtt 251
Query: 775 tctgtaccgactgtctcttggggctacactgtgagggggatgatctatgggaggataacg 834
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 252 tctgtaccgactgtctcttggggctacactgtgaggggggtgatctatgggaggataacg 311
Query: 835 aaggatgtccggaacatgacgttggttttggcagtgcatcagctggaggctccggcggct 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaggatgtccggaacatgacgttggttttggcagtgcatcagctggaggctccggcggct 371
Query: 895 caggctacgagaccctgagacattccgtctctgaaagtagtctggagaaaattaaatatg 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 caggctacgagaccctgagacattccgtctctgaaagtagtctggagaaaattaaatatg 431
Query: 955 ggatcgtttctaggaaggtatccggtaagagctatcatttcgtggtgtgtccactatgcg 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggatcgtttctaggaaggtatccggtaagagctatcatttcgtggtgtgtccactatgcg 491
Query: 1015 gttcagaaactcaactgcctctcggtggagtgtcagcactgtcgctgaactacgtgctgc 1074
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 492 gttcagaaactcaactgcctctcggtggagtgtcagcactgccgctgaactacgtgctgc 551
Query: 1075 tgcggaggatgacgagcagagatggcgacagcgctgtcctctgtgacctctgctgtgctg 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgcggaggatgacgagcagagatggcgacagcgctgtcctctgtgacctctgctgtgctg 611
Query: 1135 ataataagg 1143
|||||||||
Sbjct: 612 ataataagg 620
>BF01025A2C03
Length = 728
Score = 803 bits (405), Expect = 0.0
Identities = 414/417 (99%)
Strand = Plus / Plus
Query: 2008 atttccgtcgtcgggacagttcgtctcggcccgccgcggctcgcgtgaggccgcgtgtcg 2067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atttccgtcgtcgggacagttcgtctcggcccgccgcggctcgcgtgaggccgcgtgtcg 371
Query: 2068 atggttcatacgccctgcatgtagcacctcgaacacctggacactacctgctggctgtca 2127
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 372 atggttcatacgccctgcatgtagctcctcgaacacctggacactacctgctggctgtca 431
Query: 2128 cagtcgacaaccagcccataaagggtagtccgttctcgtgttcagctcgcctgtccaagt 2187
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctgtcgacaaccagcccataaagggtagtccgttctcgtgttcagctcgcctgtccaagt 491
Query: 2188 cccactcgggacagttccattgctgttcgttctgttcgtcgggaggtcgccgggacgcca 2247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cccactcgggacagttccattgctgttcgttctgttcgtcgggaggtcgccgggacgcca 551
Query: 2248 cttgcggctgtggatcctctatgggcggaggttataaaggctgcggtcacggtcacgcgg 2307
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cctgcggctgtggatcctctatgggcggaggttataaaggctgcggtcacggtcacgcgg 611
Query: 2308 gctggccggggacgagacactggtcctgctgcggagggacgtcccgccacgcgccatgta 2367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gctggccggggacgagacactggtcctgctgcggagggacgtcccgccacgcgccatgta 671
Query: 2368 ccacccgcactaccaacgacacaccacacacataccacgtgtcgctctgaacatgta 2424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ccacccgcactaccaacgacacaccacacacataccacgtgtcgctctgaacatgta 728
Score = 174 bits (88), Expect = 5e-43
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 1908 ctacaagatctccgagtggactgccagcacacagctatattagagttacgtgacagcaac 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctacaagatctccgagtggactgccagcacacagctatattagagttacgtgacagcaac 60
Query: 1968 ggagatcgtatctggtgcggcggcgagacggt 1999
|||||||||||||||||||| |||||||||||
Sbjct: 61 ggagatcgtatctggtgcggtggcgagacggt 92
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 305,398
Number of extensions: 6742
Number of successful extensions: 6742
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6740
Number of HSP's successfully gapped: 3
Length of query: 2917
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2899
Effective length of database: 8,109,745
Effective search space: 23510150755
Effective search space used: 23510150755
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)