BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14786 (UTR included)
(3238 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015B1E04 1320 0.0
>BF01015B1E04
Length = 702
Score = 1320 bits (666), Expect = 0.0
Identities = 694/702 (98%), Gaps = 1/702 (0%)
Strand = Plus / Plus
Query: 2244 gcgggcgcttcgttggaggctggtttgatcctgtacttgcacgcggcctccttgaccggc 2303
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcccttcgttggaggctggtttgatcctgtacttgcacgcggcctccttgaccggc 60
Query: 2304 ctgggtacgccgttgcgtgctctgcgcgtgctgcctagagcacgacgcacgccgctcgca 2363
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgggtacgccgttgcgagctctgcgcgtgctgcctagagcacgacgcacgccgctcgca 120
Query: 2364 cgaatcatcgcgctatgtacggtgctgctcgcgcactccacggctcaacctctactggtt 2423
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaatcatcgcgctatgtaccgtgctgctcgcgcactccacggctcaacctctactggtt 180
Query: 2424 aagatactcggtataacaaatttcgatctgctgggagagttcggtcgtatagagtggctc 2483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagatactcggtataacaaatttcgatctgctgggagagttcggtcgtatagagtggctc 240
Query: 2484 ggtaatttcaaactggtgctcctctacaacgctatcttcgcggccactgtgactctatgt 2543
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtaacttcaaactggtgctcctctacaacgctatcttcgcggccactgtgactctatgt 300
Query: 2544 ctggtcagcaagttcacagcgagcgtgagaagagaactatataacagatttaaatgggtg 2603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctggtcagcaagttcacagcgagcgtgagaagagaactatataacagatttaaatgggtg 360
Query: 2604 gccaatatgttcagtgtgccagaagaagtgccgagtgggaatattacaaaaacgaataaa 2663
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gccaatatgttcactgtgccagaagaagtgccgagtgggaatattacaaaaacgaataaa 420
Query: 2664 cgagtaagtacggaacgctcgttcaacattgagaagactgaatcactagatccatcacat 2723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgagtaagtacggaacgctcgttcaacattgagaagactgaatcactagatccatcacat 480
Query: 2724 ttgaaaacagagtagcacttttttatggaatattacacttaaaaaatatgaaaatattaa 2783
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgaaagcagagtagcacttttttatggaatattacacttaaaaaatatgaaaatattaa 540
Query: 2784 taatagaatctgtcactgtattaatatttatcgattaaaatgttaattgatgtcacagat 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taatagaatctgtcactgtattaatatttatcgattaaaatgttaattgatgtcacagat 600
Query: 2844 aataaaaaaaattcatttcatgtttgtgataaatataaatgtaattattttgccgacgtt 2903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aataaaaaaaattcatttcatgtttgtgataaatataaatgtaattattttgccgacgtt 660
Query: 2904 tcgtttagactgctagacatttttgttata-ttaagaatgta 2944
|||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 661 tcgtttagactgctagacatttttgtaatatttaagaatgta 702
Score = 355 bits (179), Expect = 3e-97
Identities = 188/191 (98%)
Strand = Plus / Plus
Query: 1665 gcgggcgcttcgttggaggctggtttgatcctgtacttgcacgcggcctccttgaccggc 1724
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcccttcgttggaggctggtttgatcctgtacttgcacgcggcctccttgaccggc 60
Query: 1725 ctgggtacgccgttgcgtgctctgcgcgtgctgcctagagcacgacgcacgccgctcgca 1784
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgggtacgccgttgcgagctctgcgcgtgctgcctagagcacgacgcacgccgctcgca 120
Query: 1785 cgaatcatcgcgctatgtacggtgctgctcgcgcactccacggctcaacctctactggtt 1844
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaatcatcgcgctatgtaccgtgctgctcgcgcactccacggctcaacctctactggtt 180
Query: 1845 aagatactcgg 1855
|||||||||||
Sbjct: 181 aagatactcgg 191
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 402,638
Number of extensions: 8331
Number of successful extensions: 8331
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8331
Number of HSP's successfully gapped: 2
Length of query: 3238
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3220
Effective length of database: 8,109,745
Effective search space: 26113378900
Effective search space used: 26113378900
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)