BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08636 (UTR included)
(6151 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A1C12 1647 0.0
BF01041A2B07 1558 0.0
>BF01033A1C12
Length = 843
Score = 1647 bits (831), Expect = 0.0
Identities = 840/843 (99%)
Strand = Plus / Plus
Query: 5008 agaaaaccttatcggtggacaccggcatgcatcacaccggcgagagaaaacgcttgcgcc 5067
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaaaaccttatccgtggacaccggcatgcatcacaccggcgagagaaaacgcttgcgcc 60
Query: 5068 agcagcgcaaatttagtctgggatctttgttcggaaaccgaggcagacgacaggatatcg 5127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcagcgcaaatttagtctgggatctttgttcggaaaccgaggcagacgacaggatatcg 120
Query: 5128 agctgaacatagccagtgacaccagctggaccgaaagtgcatcaacatccagcagtgact 5187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctgaacatagccagtgacaccagctggaccgaaagtgcatcaacatccagcagtgact 180
Query: 5188 cggaatcaataccacgtactccagtatttgaagagtttgaaaaggctaatgccaggagag 5247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggaatcaataccacgtactccagtatttgaagagtttgaaaaggctaatgccaggagag 240
Query: 5248 ccagaagttcgtctagcgcaagcagtatgccattgctaagcaaagacggcggatctgatt 5307
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 ccagaagttcgtctagcgcaagcagtatgccattgcaaagcaaagacggcggatctgatt 300
Query: 5308 gggaagtaatgatgctcgtagaagagttagcgaagagagaacaagaaagagatgacgcca 5367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggaagtaatgatgctcgtagaagagttagcgaagagagaacaagaaagagatgacgcca 360
Query: 5368 gaagacaagcctacgctctgagggacctggaagaggaatccgacatgggacaacgcgaca 5427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagacaagcctacgctctgagggacctggaagaggaatccgacatgggacaacgcgaca 420
Query: 5428 gtctcgacgactccaacactgaagactcggcctcacgcagcccaaccacagctgacagcg 5487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtctcgacgactccaacactgaagactcggcctcacgcagcccaaccacagctgacagcg 480
Query: 5488 accccgcgctacatgtccaaccagaaccggcaacttcgaggcagtccaggcgcctcattc 5547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accccgcgctacatgtccaaccagaaccggcaacttcgaggcagtccaggcgcctcattc 540
Query: 5548 tcagagcatcgagcttggacagcgactctaaagctacgtcatctcaaccaaggaaatacg 5607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcagagcatcgagcttggacagcgactctaaagctacgtcatctcaaccaaggaaatacg 600
Query: 5608 gctccctgaagagctgcagatcagactatcacaaaaggctataatctgtttcacaaagaa 5667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gctccctgaagagctgcagatcagactatcacaaaaggctataatctgtttcacaaagaa 660
Query: 5668 atattaaatacgacatgcgaacgaaaattaccattgtagtaatgttaacgtacattttgt 5727
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 661 atattaaatacgacatgcgaacgaaaattaccactgtagtaatgttaacgtacattttgt 720
Query: 5728 tagtgagctatgaaacgaacgagagaatttgaatggcatacaaaatggcgaccaacattt 5787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tagtgagctatgaaacgaacgagagaatttgaatggcatacaaaatggcgaccaacattt 780
Query: 5788 agttggcgcccaattgatgtttatcgtaatctttattctttcaaatcatatattaatatt 5847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agttggcgcccaattgatgtttatcgtaatctttattctttcaaatcatatattaatatt 840
Query: 5848 tac 5850
|||
Sbjct: 841 tac 843
>BF01041A2B07
Length = 812
Score = 1558 bits (786), Expect = 0.0
Identities = 805/812 (99%)
Strand = Plus / Plus
Query: 3946 cagatatgcccgacgatgtttttgaattaccgaccccaattgaatctgcgccattaaaag 4005
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 cagatatgcccgacgatgtttttgaattaccnnccccaattgaatctgcgccattaaaag 60
Query: 4006 agcaaataaagatcccggaagctgaacagcaatttacggaagcagatatcgaaccggaag 4065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcaaataaagatcccggaagctgaacagcaatttacggaagcagatatcgaaccggaag 120
Query: 4066 ttaggagtgattacaatttacaacaaaacattgatccaacatatgattataaatcccttc 4125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaggagtgattacaatttacaacaaaacattgatccaacatatgattataaatcccttc 180
Query: 4126 gacctggagatataagagtgccgtcgccaaagaagaaactaaccataatatcgacggtag 4185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacctggagatataagagtgccgtcgccaaagaagaaactaaccataatatcgacggtag 240
Query: 4186 ccaatcaaaggagcctatggaaaggttcattagaagaacaggaatattatggagagcttc 4245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaatcaaaggagcctatggaaaggttcattagaagaacaggaatattatggagagcttc 300
Query: 4246 tgataggaataaaacaagtaatgcaaattcatttgcaagaaatccaaggaaaattccgtg 4305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgataggaataaaacaagtaatgcaaattcatttgcaagaaatccaaggaaaattccgtg 360
Query: 4306 aaagcttctgtagcctagaaaacgaagtgaggaaacgagatgaaatcataagtcaactac 4365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagcttctgtagcctagaaaacgaagtgaggaaacgagatgaaatcataagtcaactac 420
Query: 4366 agcaacgaatacaggaattggaaaagcacggtctgtcagggaaactggcaagttctgaaa 4425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agcaacgaatacaggaattggaaaagcacggtctgtcagggaaactggcaagttctgaaa 480
Query: 4426 tagagatggaagaggacttccaaatgagaactcagtcaaaggatccaagctccgaaagcg 4485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagagatggaagaggacttccaaatgagaactcagtcaaaggatccaagctccgaaagcg 540
Query: 4486 acgacggcatcgatgaaggattcatgcgaggcgactctctagacaccgttttcacgacat 4545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acgacggcatcgatgaaggattcatgcgaggcgactctctagacaccgttttcacgacat 600
Query: 4546 caccgccagaagtaacttcagaacctaaagcagttaagaaagtacgagaagaagaagaat 4605
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 601 caccgccagaagtaacttcagaagttaaagcagttaagaaagtacgagaagaagaagaat 660
Query: 4606 acgaagaacatgaaatcgctgatgagagcgtatcagacatattggaaggaatagaactaa 4665
||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||
Sbjct: 661 acgaagaacatgaaatcgctgatgagagcgtgttagacattttggaaggaatagaactaa 720
Query: 4666 ataaactatcgtactcggatattcagagcttgggtgaatatttgtctaataaatcaaaag 4725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ataaactatcgtactcggatattcagagcttgggtgaatatttgtctaataaatcaaaag 780
Query: 4726 ccagccaacgagagttcgctgtgagcaagtcc 4757
||||||||||||||||||||||||||||||||
Sbjct: 781 ccagccaacgagagttcgctgtgagcaagtcc 812
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 167,254
Number of extensions: 34717
Number of successful extensions: 34717
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 34717
Number of HSP's successfully gapped: 2
Length of query: 6151
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6133
Effective length of database: 8,109,745
Effective search space: 49737066085
Effective search space used: 49737066085
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)