BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08577 (UTR included)
(2893 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018B1G08 1520 0.0
BF01029B1H01 78 9e-14
>BF01018B1G08
Length = 817
Score = 1520 bits (767), Expect = 0.0
Identities = 805/817 (98%), Gaps = 3/817 (0%)
Strand = Plus / Plus
Query: 1536 aagaatttagcgaaacatatttatagaccttcgagtagttggcaacagacttggatctta 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaatttagcgaaacatatttatagaccttcgagtagttggcaacagacttggatctta 60
Query: 1596 ctttatcggaattaccttataacaaccaggaattattctctcttcatgtatagagttgca 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttatcggaattaccttataacaaccaggaattattctctcttcatgtatagagttgca 120
Query: 1656 gcacacgtagttatagctctaatatttggttatctatacctcggtgtcggaagtgaggcc 1715
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcacacgtagttatagctctaatatttggttatctatacctcggtgtcggaagtgaggcg 180
Query: 1716 agcagcgtgctcggtaactacgtctatctctatggatctatgctactagttgtgtatacc 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcagcgtgctcggtaactacgtctatctctatggatctatgctactagttgtgtatacc 240
Query: 1776 ggcaagatgtctgtcacattgtcttgtgag---gaaaaggatatacttaaaggcgaatac 1832
||||||||||||||||||||||||| | |||| ||||||||||||||||||||||
Sbjct: 241 ggcaagatgtctgtcacattgtcttttccactcgaaatggatatacttaaaggcgaatac 300
Query: 1833 ttcaatcgatggtacaacttaggaccttatatattttcagttttagccgtcgaattaccg 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcaatcgatggtacaacttaggaccttatatattttcagttttagccgtcgaattaccg 360
Query: 1893 tttcagatgttatcttgtgtatcatacgtggtgctttcctactggctgactgataatcct 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttcagatgttatcttgtgtatcatacgtggtgctttcctactggctgactgataatcct 420
Query: 1953 ctagaacctcaacgagctactttgtttcttgcgacggtcgtggctacgtcgctatgtgcg 2012
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctagaacctcaacgagctactttgtttcttgcgacggtcgtggctacgtcgctatgtgcc 480
Query: 2013 caggcttggggatactttataggttcgaccacaccgacaaagatcgctgtattcattggt 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caggcttggggatactttataggttcgaccacaccgacaaagatcgctgtattcattggt 540
Query: 2073 ccagtgctggcatgtcttttctccgtgtttggattttgtctctctcttcgggacactcct 2132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccagtgctggcatgtcttttctccgtgtttggattttgtctctctcttcgggacactcct 600
Query: 2133 tactcctttagatggcttcatcacatatcatattttagagcgggttttcatgtcgccgtc 2192
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 601 tactcctttagatggcttcatcacatatcatattttagagcgggctttcatgtcgccgtc 660
Query: 2193 cactctgtttatggatttaatagaaccaaaatgcattgttccaaagaatattgccattac 2252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cactctgtttatggatttaatagaaccaaaatgcattgttccaaagaatattgccattac 720
Query: 2253 ataactccaaacaaattccttgtggaaatggatatggctaacatagacgtgggcatcaat 2312
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 721 ataactccaaacaaattccttgtagaaatggatatggctaacatagacgtgggcatcaat 780
Query: 2313 atggcaatagtgctagctaccacagtactaatgcacg 2349
|||||||||||||||||||||||||||||||||||||
Sbjct: 781 atggcaatagtgctagctaccacagtactaatgcacg 817
>BF01029B1H01
Length = 700
Score = 77.8 bits (39), Expect = 9e-14
Identities = 105/127 (82%), Gaps = 5/127 (3%)
Strand = Plus / Plus
Query: 520 ggcgtttgcatattctcagtcgcgatgatcgtatgaaccagttgttacataggcttaatc 579
||||||| |||||||||||| ||| |||| |||| |||||||||||| ||| | ||||
Sbjct: 275 ggcgtttatatattctcagtcacgacgatcatatggaccagttgttacttagacgcaatc 334
Query: 580 tagcaacgtactatttgcgtcatgcaaaaccaaataaaagccgcccttcatcctcaacag 639
|||||||||||||| | |||||||||||| | |||| | | ||||||||||||||
Sbjct: 335 tagcaacgtactat-----tgatgcaaaaccaagttaaagactcttttcatcctcaacag 389
Query: 640 tgccaga 646
|||||||
Sbjct: 390 tgccaga 396
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 272,571
Number of extensions: 4196
Number of successful extensions: 4196
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4196
Number of HSP's successfully gapped: 3
Length of query: 2893
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2875
Effective length of database: 8,109,745
Effective search space: 23315516875
Effective search space used: 23315516875
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)