BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16242 (UTR included)
(1785 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2F01 1509 0.0
BF01052A1F05 660 0.0
BF14_223_C1 636 0.0
>BF01047B2F01
Length = 773
Score = 1509 bits (761), Expect = 0.0
Identities = 770/773 (99%)
Strand = Plus / Plus
Query: 502 ctcacactgtgagatggcctccgtacttatatctgatctgtacggcagggtgttctctgc 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcacactgtgagatggcctccgtacttatatctgatctgtacggcagggtgttctctgc 60
Query: 562 taaggatatagcttacgcgttcgagcgtctgctggagaagctcccggacctggtgctgga 621
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaggatatagcctacgcgttcgagcgtctgctggagaagctcccggacctggtgctgga 120
Query: 622 cacgcctgaagctgctgtgctgatgtccaacttcatagctcgctgtgtcgccgacgactg 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacgcctgaagctgctgtgctgatgtccaacttcatagctcgctgtgtcgccgacgactg 180
Query: 682 cctgccgccgaagttcgtgcaatccaagactggggctgatcttaactcgtcagccagaca 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctgccgccgaagttcgtgcaatccaagactggggctgatcttaactcgtcagccagaca 240
Query: 742 agcaataaacagggcggagactcttctgtcaatgaagcaggggctggtgaggctggacaa 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcaataaacagggcggagactcttctgtcaatgaagcaggggctggtgaggctggacaa 300
Query: 802 tatatggggggtcggaggtggcatcaggccggtcaaatccctgattcgtcagatccagct 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatatggggggtcggaggtggcatcaggccggtcaaatccctgattcgtcagatccagct 360
Query: 862 gttgctgaaggagtatcttacatctggggacctggctgaggcgatgcgctgtgtcagaga 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgctgaaggagtatcttacatctggggacctggctgaggcgatgcgctgtgtcagaga 420
Query: 922 cctggaagttccacacttccaccatgagctggtctatgagacggtgctactagcagtgga 981
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 cctggaagttccacacttccaccatgagctggtctatgagacggtgctactagcggtgga 480
Query: 982 agccataaactcgagcgtagaggaacagctctgtaccttcctagccgagctgagacgatg 1041
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agccataaactcaagcgtagaggaacagctctgtaccttcctagccgagctgagacgatg 540
Query: 1042 tgtcatcgtgacaccagaccagatggacaggggcttccttcgtgtgctggaggacatgtc 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtcatcgtgacaccagaccagatggacaggggcttccttcgtgtgctggaggacatgtc 600
Query: 1102 ggacatagtcctggacgtgccgctggcctacatcatgctggacaggttcgtggagcgctg 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggacatagtcctggacgtgccgctggcctacatcatgctggacaggttcgtggagcgctg 660
Query: 1162 ccagctgaggttccgtctgggggaccacgtgctggccaggatgcccaccaggggccgcaa 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccagctgaggttccgtctgggggaccacgtgctggccaggatgcccaccaggggccgcaa 720
Query: 1222 gcggttcgtgtctgaaggagatggcggtctgatcaaagaccacgctctcaaac 1274
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcggttcgtgtctgaaggagatggcggtctgatcaaagaccacgctctcaaac 773
>BF01052A1F05
Length = 751
Score = 660 bits (333), Expect = 0.0
Identities = 342/345 (99%)
Strand = Plus / Plus
Query: 200 ggtggtgctgggggtaagggcgtgtggggtgttcctgggtccgagctgttggaggagtat 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggtggtgctgggggtaagggcgtgtggggtgttcctgggtccgagctgttggaggagtat 466
Query: 260 gtggaggacgcgaatgaccccaactacgactccgaggccgtcaacggtgacgtggagttc 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gtggaggacgcgaatgaccccaactacgactccgaggccgtcaacggtgacgtggagttc 526
Query: 320 aagcaggtcatagtggaggccgatcctgaggatattgtgcgcaaatctgaaccggtcatc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aagcaggtcatagtggaggccgatcctgaggatattgtgcgcaaatctgaaccggtcatc 586
Query: 380 ctggagtacttcgagcatggtgacactaatgcagctgctgaagacctgctggagttcgtc 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ctggagtacttcgagcatggtgacactaatgcagctgctgaagacctgctggagttcgtc 646
Query: 440 acagcctccaggagtcacctggtctgtgaaacaatcatcgagatagcacttgaccacaaa 499
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 acagcctttaggagtcacttggtctgtgaaacaatcatcgagatagcacttgaccacaaa 706
Query: 500 ccctcacactgtgagatggcctccgtacttatatctgatctgtac 544
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ccctcacactgtgagatggcctccgtacttatatctgatctgtac 751
>BF14_223_C1
Length = 1235
Score = 636 bits (321), Expect = 0.0
Identities = 344/349 (98%), Gaps = 2/349 (0%)
Strand = Plus / Plus
Query: 1439 tcgtgtaacagctttagtatagtctgtggcgtgttggcgccaactctgacgttttgacgc 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtgtaacagctttagtatagtctgtggcgtgttggcgccaactctgacgttttgacgc 60
Query: 1499 catgctgtctcccagctgattggaagttttgtaatcctgtaggttttttttttttaattt 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgctgtctcccagctgattggaagttttgtaatcctgtaggttttttttttttaattt 120
Query: 1559 tcccaaagcggcgagcgtcgcgtctgttttgattcgtccggaaatggagatgg-tttttt 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 tcccaaagcggcgagcgtcgcgtctgttttgattcgtccggaaatggagatggttttttt 180
Query: 1618 ttattttcggctaaaaaggtgttatatttgaatgtcatttaaataataaaaagaaagtat 1677
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 181 ttattttcggctaaaaaggtgttatattcgaatgtcatttaaataataaaaagaaagtat 240
Query: 1678 ttctttacgtgtctagttaattataatga-tttcttttcttgctacttatatagaataag 1736
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||
Sbjct: 241 ttctttacgtgtctagttaattataatgatttttttttcttgctacttatatagaaaaag 300
Query: 1737 aaatattttgtatgtcaaatattttttattatctgtataacatcggttt 1785
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatattttgtatgtcaaatattttttattatctgtataacatcggttt 349
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,268
Number of extensions: 18105
Number of successful extensions: 18105
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 18103
Number of HSP's successfully gapped: 3
Length of query: 1785
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1768
Effective length of database: 8,119,229
Effective search space: 14354796872
Effective search space used: 14354796872
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)