BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19834 (UTR included)
(1594 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2747_C1 852 0.0
>BF14_2747_C1
Length = 788
Score = 852 bits (430), Expect = 0.0
Identities = 433/434 (99%)
Strand = Plus / Plus
Query: 99 atcgaacgagaggaaaacgggaaccgagttactctgttctttgacttggacggctgtggt 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atcgaacgagaggaaaacgggaaccgagttactctgttctttgacttggacggctgtggt 413
Query: 159 ttgagtaatgtggatatggagttgactaattacttgatcggtctcttcaagagctactat 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttgagtaatgtggatatggagttgactaattacttgatcggtctcttcaagagctactat 473
Query: 219 ccgagcttcttaaattatattattatttaccaaatgccgtgggttatgtccgcggccttt 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ccgagcttcttaaattatattattatttaccaaatgccgtgggttatgtccgcggccttt 533
Query: 279 aagataattaagtcactactgccagcgaaaggcgtagagaagatgaaattcgttaataaa 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 aagataattaagtcactactgccagcgaaaggcgtagagaagatgaaattcgttaataaa 593
Query: 339 gatactctaaaagagtttgtagagccagagcaagctttggcctgctggggtggtaaagat 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gatactctaaaagagtttgtagagccagagcaagctttggcctgctggggtggtaaagat 653
Query: 399 aattacgtctatgagttcataccagagaataggacccaggagagccacacaccaaaaaaa 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aattacgtctatgagttcataccagagaataggacccaggagagccacacaccaaaaaaa 713
Query: 459 gttacgttcgcggaacaaggagataaccactcaccaggtgagatgcttaggattaatccg 518
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 714 gttacgttcgcggaacaaggagataatcactcaccaggtgagatgcttaggattaatccg 773
Query: 519 agcaatctgatcat 532
||||||||||||||
Sbjct: 774 agcaatctgatcat 787
Score = 184 bits (93), Expect = 3e-46
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 1 cattttttccccacggcagagacgtcgacggctgtctgctactgatcataaagtccaaaa 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 229 cattttttccccacggcagagacgtcgacggctgtctactactgatcataaagtccaaaa 288
Query: 61 aacacgtcaaaggcgtcaaagacttcgaggaaataaa 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 289 aacacgtcaaaggcgtcaaagacttcgaggaaataaa 325
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 156,969
Number of extensions: 2647
Number of successful extensions: 2647
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2647
Number of HSP's successfully gapped: 2
Length of query: 1594
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1577
Effective length of database: 8,119,229
Effective search space: 12804024133
Effective search space used: 12804024133
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)