BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00149 (UTR included)
(1972 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_547_C1 1816 0.0
BF01005A1F07 103 1e-21
BF14_281_C2 88 6e-17
BF14_281_C1 76 2e-13
>BF14_547_C1
Length = 1513
Score = 1816 bits (916), Expect = 0.0
Identities = 973/991 (98%), Gaps = 1/991 (0%)
Strand = Plus / Plus
Query: 311 ggtttgaaacatggccgaggatatattacatgactttttaactattgtttttgataaacc 370
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 1 ggtttgaaacatggccgaggatatattacatgactttttn-ctgttgtttttgataaacc 59
Query: 371 aggttactcgcagaagataattgaaataaataatattacatcaggaggtgctaactacac 430
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 60 aggttactcgcagaagatgattgaaataaataatattacatcaggaggtgctaactatac 119
Query: 431 ttctgctctattttcgataaacttgcaaacgtcagataaaacaataaaacttttcgcaaa 490
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ttctgctctattttcgataaatttgcaaacgtcagataaaacaataaaacttttcgcaaa 179
Query: 491 agttgcaacgatgagcaaagagatgagaacagcagttaaagcagacaagatgtttaaaac 550
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 180 agttgcaacgatgagcaaagagatgagaacagcagttaaagcagacaagatgtttagaac 239
Query: 551 agaggaatttgtttacaataaacttatacctgtttataataatctccagaaggatttaga 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 agaggaatttgtttacaataaacttatacctgtttataataatctccagaaggatttaga 299
Query: 611 tgaagaacacaagttcgtatttcctgaattctacggatgtaataatgagttcggtaaaga 670
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 300 tgaagaacacaagttcgtatttcccgaattctacggatgtaataatgagttcggtaaaga 359
Query: 671 aacagtcatattagaaaatctagtagaacatggttataagtcttacagtcggtttaagtc 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aacagtcatattagaaaatctagtagaacatggttataagtcttacagtcggtttaagtc 419
Query: 731 catggattgggatcatggcagagttggtgtggaggctttagcacggttccacgctttgtc 790
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 420 catggattgggatcatggcagagttggtgtggaggctttagcgcggttccacgctttgtc 479
Query: 791 gttcgcactgagtaaacgtgatccagaaggtttccaaaaaatagctacggacatggcgta 850
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 480 gttcgcactgagtaaacgtgatccagaaggtttccaaaacatagctacggacatggcgta 539
Query: 851 cacctttgataaagatactttaagtcaaacagctatagatcaattcaaggaaatggtgga 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cacctttgataaagatactttaagtcaaacagctatagatcaattcaaggaaatggtgga 599
Query: 911 gaaagcgttaagtgttctgaaggaggaggagtatcgtgagagaatcagaaaatttttatt 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gaaagcgttaagtgttctgaaggaggaggagtatcgtgagagaatcagaaaatttttatt 659
Query: 971 tgaaacgaacttgttggataaacactataagccgctcagcgcgccagtgttggcccacgg 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tgaaacgaacttgttggataaacactataagccgctcagcgcgccagtgttggcccacgg 719
Query: 1031 tgattacagattaagcaacttgttatttaaggaaaagggtcacgatctgagtgcagtggt 1090
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 720 tgattacagattaagcaacttgttatttaaggaaaagggtcacgttctgagtgcagtggt 779
Query: 1091 tgttgattaccaaaccctccataccgggtgtcctgtagcagatctcttctactttatttt 1150
||| |||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 780 tgtcgattaccaaaccgtccatactgggtgtcctgtggcagatctcttctactttatttt 839
Query: 1151 catgggttcagatgaacacttccgccgtctctattatgacaaactagtaaatcattacta 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 catgggttcagatgaacacttccgccgtctctattatgacaaactagtaaatcattacta 899
Query: 1211 tacaagtctagaagaagcgctccagatgctggctgtggatcctgtagaggtgtatccgag 1270
|||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||
Sbjct: 900 tacaagtctagaagaagcgctccagaggctggctgtggatccagtagaagtgtatccgag 959
Query: 1271 agagagctttgaaagtgatttgaaagagtta 1301
|||||||||||||||||||||||||||||||
Sbjct: 960 agagagctttgaaagtgatttgaaagagtta 990
>BF01005A1F07
Length = 694
Score = 103 bits (52), Expect = 1e-21
Identities = 106/124 (85%)
Strand = Plus / Plus
Query: 1175 ccgtctctattatgacaaactagtaaatcattactatacaagtctagaagaagcgctcca 1234
|||||| |||| ||||||||||| ||||||||||||||||||||| |||| ||| ||| |
Sbjct: 435 ccgtctttattttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaa 494
Query: 1235 gatgctggctgtggatcctgtagaggtgtatccgagagagagctttgaaagtgatttgaa 1294
|| | || |||| ||||| ||||| |||||||| |||||| |||||||| ||||||||
Sbjct: 495 gaggttgtctgtcgatcccgtagaagtgtatccaagagagcaatttgaaagagatttgaa 554
Query: 1295 agag 1298
||||
Sbjct: 555 agag 558
>BF14_281_C2
Length = 931
Score = 87.7 bits (44), Expect = 6e-17
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 1175 ccgtctctattatgacaaactagtaaatcattactatacaagtctagaagaagcgctcca 1234
|||||| |||| ||||||||||| ||||||||||||||||||||| |||| ||| ||| |
Sbjct: 823 ccgtctttattttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaa 882
Query: 1235 gatgctggctgtggatcctgtagaggtgtatccgagagag 1274
|| | || |||| ||||| ||||| |||||||| ||||||
Sbjct: 883 gaggttgtctgtcgatcccgtagaagtgtatccaagagag 922
>BF14_281_C1
Length = 1235
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 1155 ggttcagatgaacacttccgccgtctctattatgacaaactagtaaatcattactataca 1214
|||||||||||| | || | |||||| |||| ||||||||||| ||||||||||||||||
Sbjct: 1134 ggttcagatgaagagtttctccgtctttattttgacaaactagcaaatcattactataca 1193
Query: 1215 agtctagaag 1224
||||| ||||
Sbjct: 1194 agtctcgaag 1203
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 245,412
Number of extensions: 5017
Number of successful extensions: 5017
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5016
Number of HSP's successfully gapped: 4
Length of query: 1972
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1955
Effective length of database: 8,119,229
Effective search space: 15873092695
Effective search space used: 15873092695
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)