BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11723 (UTR included)
(2800 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2630_C1 2383 0.0
BF14_1531_C1 884 0.0
>BF14_2630_C1
Length = 2383
Score = 2383 bits (1202), Expect = 0.0
Identities = 1220/1227 (99%)
Strand = Plus / Plus
Query: 492 aggaacaggatgtcgttcactatgaaagaaggtggttttggcgtgggagactatgttgca 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 aggaacaggatgtcgttcactatgaaagaaggtggttttggcgtgggagactatgttgca 1216
Query: 552 tttggggtgttatgtgcgtcttcatgcgctggaggtgtttggtacagcgcggtgggatcc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 tttggggtgttatgtgcgtcttcatgcgctggaggtgtttggtacagcgcggtgggatcc 1276
Query: 612 aggagcaaggctgtagtcgacttgaaggactaccttctcggaggaaaggctatgtccacc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 aggagcaaggctgtagtcgacttgaaggactaccttctcggaggaaaggctatgtccacc 1336
Query: 672 tttcccgtcgccatgtcgcttatcgccagttacgtatccggcgtgacgatacttggtact 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 tttcccgtcgccatgtcgcttatcgccagttacgtatccggcgtgacgatacttggtact 1396
Query: 732 ccggccgagatttacaattacggctccgagtattggctggtggtggtgggtgtgactctt 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 ccggccgagatttacaattacggctccgagtattggctggtggtggtgggtgtgactctt 1456
Query: 792 agctgcttgatcgtagccaccgtctacttaccagtgttctgtactctgagactgtcttcc 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 agctgcttgatcgtagccaccgtctacttaccagtgttctgtactctgagactgtcttcc 1516
Query: 852 tcatatgagtatcttgaacttcgtttcaatcggcacgtgcgggctgtggcgtctgtgctt 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 tcatatgagtatcttgaacttcgtttcaatcggcacgtgcgggctgtggcgtctgtgctt 1576
Query: 912 tttttattggacgaagtattatttctgcctatggtcgtgtacgttcctgctttagcattt 971
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1577 tttttattggatgaagtattatttctgcctatggtcgtgtacgttcctgctttagcattt 1636
Query: 972 aatcaattgactggttttaatgtgttcgcggttggtggtgttatggtccttatatgtgga 1031
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1637 aatcagttgactggttttaatgtgttcgcggttggtggtgttatggtccttatatgtgga 1696
Query: 1032 ctttatacagtattaggtggtctccgcgcggtcgtatggacggactcggttcagaccggg 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1697 ctttatacagtattaggtggtctccgcgcggtcgtatggacggactcggttcagaccggg 1756
Query: 1092 gtcatgtttatcggtgtgttacttgtggcggcggctgggacgcttgcggtcgggggcgtt 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 gtcatgtttatcggtgtgttacttgtggcggcggctgggacgcttgcggtcgggggcgtt 1816
Query: 1152 agtgctgtcgttagcatcgcaaacgaatccgggagacttgagatctccaattggagcttt 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 agtgctgtcgttagcatcgcaaacgaatccgggagacttgagatctccaattggagcttt 1876
Query: 1212 tctccgtacgaacgtcaaactggttggggtgcgatattcggtggtttcctctactggact 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1877 tctccgtacgaacgtcaaactggttggggtgcgatattcggtggtttcctctactggact 1936
Query: 1272 tgcttcaactccgtcaaccagaccatggtccagcgttacatagctttaccatcaaagcgg 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1937 tgcttcaactccgtcaaccagaccatggtccagcgttacatagctttaccatcaaagcgg 1996
Query: 1332 aaggcgatcaccgcgctcttcatcttctgtatcggcgcgatcctcgctatatctctgtgc 1391
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1997 aaggcgatcacagcgctcttcatcttctgtatcggcgcgatcctcgctatatctctgtgc 2056
Query: 1392 gtgtggtgtggcctggcggcgtggggagcctgggtccagggcggctgcgaccccagcggc 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2057 gtgtggtgtggcctggcggcgtggggagcctgggtccagggcggctgcgaccccagcggc 2116
Query: 1452 tctcccctggtcggtgaccaattactcccagcgttcgtgacatacgtcgctgaagtccaa 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 tctcccctggtcggtgaccaattactcccagcgttcgtgacatacgtcgctgaagtccaa 2176
Query: 1512 cacctgcctggtctctccggcgtattcctcgctggagtatttggagccggattaagttcc 1571
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2177 cacctgcctggtctctctggcgtattcctcgctggagtatttggagccggattaagttcc 2236
Query: 1572 ctgtcggcggtgctgaacgcgtgtgcgctggtcgctgtggaggacctcctccacggctgg 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2237 ctgtcggcggtgctgaacgcgtgtgcgctggtcgctgtggaggacctcctccacggctgg 2296
Query: 1632 ttgcgtctccgtctgcctcccatagcggagggagtgctcgctcgctccgtgaccgctctc 1691
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2297 ttgcgtctccgtctgcctcccatagcggnnngagtgctcgctcgctccgtgaccgctctc 2356
Query: 1692 ctcgctgtcatctcactcctgatgctg 1718
|||||||||||||||||||||||||||
Sbjct: 2357 ctcgctgtcatctcactcctgatgctg 2383
>BF14_1531_C1
Length = 1354
Score = 884 bits (446), Expect = 0.0
Identities = 479/490 (97%)
Strand = Plus / Plus
Query: 2310 taggtatcttaaggtctcattgacatgttttggttgtaaaaaacatatcaatctggaaat 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 taggtatcttaaggtctcattgacatgttttggttgtaaaaaacatatcaatctggaaat 427
Query: 2370 atttatctgatttaacatgtatcgagacatttttatatgcctcatcgaaaaaaattatca 2429
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 428 atttatctgatttaacatgtatcgagacatttttatatgcctcgtcgaaaaaaattatca 487
Query: 2430 gatatagcggtcgtaatacaaaatgagataagtaatctgtatgacacaaaatagtgacat 2489
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 488 gatatagcggtcgtaatactaaatgagataagtaatctgtatgacacaaaataatgacat 547
Query: 2490 acgtctgtcctcaccaacgatctgatatgaactgacattgaaaaatacaatcattttcaa 2549
||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||
Sbjct: 548 acgtctgtcctcaccaacgatctgatacgaactgacgttgaaaaatacagtcattttcaa 607
Query: 2550 aaagtttcctttcactaccacaagatggagacacttattagtcaattagtgtccataata 2609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aaagtttcctttcactaccacaagatggagacacttattagtcaattagtgtccataata 667
Query: 2610 atgacatttaatatcaacaagcagttacataccgctctacaacataaagtatttgtatgt 2669
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 668 atgacatttaatatcaacaagcagttacataccgctctacaaaataaagtatttgtatgt 727
Query: 2670 acttaatgttaatttatttaataagatgtttaatataaaaccaataagtaagtacttaat 2729
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 728 acttaatgttaatttatttaataagatgttttatataaaataaataagtaagtacttaat 787
Query: 2730 tattactacagatttttcacaaacagtaaactatagttatatgtacactatttatattac 2789
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 788 tattactacagatttttcacaaacagtacactatagttatatgtacactatttatattac 847
Query: 2790 aaaataagat 2799
||||||||||
Sbjct: 848 aaaataagat 857
Score = 505 bits (255), Expect = e-142
Identities = 258/259 (99%)
Strand = Plus / Plus
Query: 2011 ctctattccgcttatcgtatcactggatcgcgccgctcggtctcctggccactatagtcg 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctctattccgcttatcgtatcactggatcgcgccgctcggtctcctggccactatagtcg 60
Query: 2071 ttggcatgatagtaggctggttgttcgacaagccggatccaagtaagatggacgcggaac 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggcatgatagtaggctggttgttcgacaagccggatccaagtaagatggacgcggaac 120
Query: 2131 tgttcactcctgtagtgtggaggttgttgcctaaggaggcccacgagaacgctggcatga 2190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgttcactcctgtagtgtggaggttgttgcctaaggaggcccacgagaacgctggcatga 180
Query: 2191 cgcgccaggcgctgcccgtcaaagcggagtcgccggcgccctccgccaggcttatactgg 2250
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcgccaggcgctgcccgtcaaagctgagtcgccggcgccctccgccaggcttatactgg 240
Query: 2251 aacagctgccagataaggt 2269
|||||||||||||||||||
Sbjct: 241 aacagctgccagataaggt 259
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,048
Number of extensions: 5415
Number of successful extensions: 5415
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5415
Number of HSP's successfully gapped: 3
Length of query: 2800
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2783
Effective length of database: 8,119,229
Effective search space: 22595814307
Effective search space used: 22595814307
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)