BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00051 (UTR included)
(2875 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_643_C1 1576 0.0
BF01057A1B11 969 0.0
BF01049B1F05 773 0.0
>BF14_643_C1
Length = 1475
Score = 1576 bits (795), Expect = 0.0
Identities = 807/811 (99%)
Strand = Plus / Plus
Query: 1270 gccagttccctaagtactcgtccatcgcgtgcctgaacatctccaacaacaacctgagct 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gccagttccctaagtactcgtccatcgcgtgcctgaacatctccaacaacaacctgagct 724
Query: 1330 cggccacggtgggcggtccgcagccggttcagcgccccttcgcctacctcttcaccctgt 1389
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 725 cggccacggtgggcggtccgcagccggttcagcgccccttcgcctatctcttcaccctgt 784
Query: 1390 ccgtcctggacgcctccgccaacaacctcacagagttccccctcagcctcatgcagagca 1449
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 785 ccgtcctggacgcctccgccaacaacctcacggagttccccctcagcctcatgcagagca 844
Query: 1450 accgcaagatattcctggatctctctggtaacaattatcttccgtgcaaacacttcctaa 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 accgcaagatattcctggatctctctggtaacaattatcttccgtgcaaacacttcctaa 904
Query: 1510 tagccatggaggccaacaacagttccttggtgaccttcctcaactacaatcgaactttct 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tagccatggaggccaacaacagttccttggtgaccttcctcaactacaatcgaactttct 964
Query: 1570 gcgctctggacctcttgttcaactggttcactgagctgcagatagtgcccattgatcacc 1629
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 965 gcgctctggacctcttgttcaactggttcactgagctgcagatagtgcccatcgatcacc 1024
Query: 1630 tccgggtacagaaagaggtgaacgcgagctgtctgaagatccgtcccgcggagtcccgct 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 tccgggtacagaaagaggtgaacgcgagctgtctgaagatccgtcccgcggagtcccgct 1084
Query: 1690 gctcgtgcgccccggaccgcctggagctgctggacggggccgtcaccaacgtggtggccg 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 gctcgtgcgccccggaccgcctggagctgctggacggggccgtcaccaacgtggtggccg 1144
Query: 1750 tggactgctcccggagacacctgcagcagatgcccaccaacctgccgcctaacaccgtca 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 tggactgctcccggagacacctgcagcagatgcccaccaacctgccgcctaacaccgtca 1204
Query: 1810 agctcaacgtctcctacaacaatataacgtctctccaagcggtgtcggacgatccgtcgt 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 agctcaacgtctcctacaacaatataacgtctctccaagcggtgtcggacgatccgtcgt 1264
Query: 1870 acgagcacctgaggaacctgttggtggaccacaacgacatcaccagcatcgtggacctgg 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 acgagcacctgaggaacctgttggtggaccacaacgacatcaccagcatcgtggacctgg 1324
Query: 1930 aggggaccaagttcatagacaacttcatggtgttctccatcaccaacaacaagctgaaga 1989
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 aggggaccaagttcatcgacaacttcatggtgttctccatcaccaacaacaagctgaaga 1384
Query: 1990 ctattcatacatacgtgttgtcaaatcgcttcgacaccaccggaccgtcgtttctgatcg 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1385 ctattcatacatacgtgttgtcaaatcgcttcgacaccaccggaccgtcgtttctgatcg 1444
Query: 2050 cgaacaactacatccactgcgactgcaacac 2080
|||||||||||||||||||||||||||||||
Sbjct: 1445 cgaacaactacatccactgcgactgcaacac 1475
Score = 773 bits (390), Expect = 0.0
Identities = 402/406 (99%)
Strand = Plus / Plus
Query: 864 gtagcaatatggtgtctggtggcgctgatcacgttcaacacggggctgatagaaactaga 923
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 223 gtagcaatatggtgtctggtggcgctgatgacgttcaacacggggctgatagaaactaga 282
Query: 924 atggaggaagtggactccaagtacaaaagtgtggagccgcatctgacttccacggagaag 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 atggaggaagtggactccaagtacaaaagtgtggagccgcatctgacttccacggagaag 342
Query: 984 ccgaagctcgaacctcacgtcgacctgaagatgggcaagtgtttccacatgtcccgcgag 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ccgaagctcgaacctcacgtcgacctgaagatgggcaagtgtttccacatgtcccgcgag 402
Query: 1044 cactgtcccacggagaccaagtgcaagagagtggacccggtctccgtgttctgttgtgat 1103
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cactgtcccacggagaccaggtgcaagagagtggacccggtctccgtgttctgttgtgat 462
Query: 1104 gtagacagcaccaggctgaaggaagccctggcgatcactgtgactcagaacaccgtcaac 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gtagacagcaccaggctgaaggaagccctggcgatcactgtgactcagaacaccgtcaac 522
Query: 1164 ctgcacgtgttgaacgccaccatcgaggagttggacgtgtcccagtccatcttccgtcgc 1223
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ctgcacgtgttgaatgccaccatcgaggagttggacgtgtcccagtccatcttccgtcgc 582
Query: 1224 ctcacatccatggcgctcactgacgggaacatcgggaggattgttg 1269
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 583 ctcacatccatggcgctcactgacggaaacatcgggaggattgttg 628
>BF01057A1B11
Length = 815
Score = 969 bits (489), Expect = 0.0
Identities = 513/521 (98%)
Strand = Plus / Minus
Query: 2355 tgtgattggttgtgcgagtgacgttcagtgttaacttgccttaaatgtcaatactatctg 2414
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 815 tgtgattggttgtgcgagtgacgttcagtgtgaacttgccttaaatgtcaatattatctg 756
Query: 2415 tcgcttcaagcttttaatgacaattcatatagaatgtggtctatggtttttgacgttttg 2474
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 755 tcgcttcaagcttttaatgacaattgctatagaatgtggtctatggtttttgacgttttg 696
Query: 2475 actttcgaacacgcccaacagcggctgtttaaataattaaactcgtcagcgaagttacaa 2534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 actttcgaacacgcccaacagcggctgtttaaataattaaactcgtcagcgaagttacaa 636
Query: 2535 agagaactgaatcaccgagttacaggacggagcgacttgtttataaactaccgtcgttaa 2594
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 635 agagaactgaattaccgagttacaggacggagcgacttgtgtataaactaccgtcgttaa 576
Query: 2595 gacagttcggcgccaagttgggaacgaggccttaataataatgaatgtattttcatatta 2654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gacagttcggcgccaagttgggaacgaggccttaataataatgaatgtattttcatatta 516
Query: 2655 aactgttgttataatattgattagtgaacgcgtagagtagatgtatgtaccaaaaatatc 2714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aactgttgttataatattgattagtgaacgcgtagagtagatgtatgtaccaaaaatatc 456
Query: 2715 atttagtttataagaaaactgaaacctaaagcctaccgctgcgaggccatgttgttatgt 2774
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 455 atttagtttataagaaaactgaaagctaaagcctaccgctgcgaggccatgttgttatgt 396
Query: 2775 gtatatgtatattgagaaaaacatattttgttaaagatttattgtgacggagtcagatat 2834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtatatgtatattgagaaaaacatattttgttaaagatttattgtgacggagtcagatat 336
Query: 2835 ttatttataagacattttgcaaatgaaatgagatcaaattt 2875
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 335 ttatttataagacatttttcaaatgaaatgagatcaaattt 295
>BF01049B1F05
Length = 797
Score = 773 bits (390), Expect = 0.0
Identities = 403/406 (99%), Gaps = 1/406 (0%)
Strand = Plus / Plus
Query: 864 gtagcaatatggtgtctggtggcgctgatcacgttcaacacggggctgatagaaactaga 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtagcaatatggtgtctggtggcgctgatcacgttcaacacggggctgatagaaactaga 355
Query: 924 atggaggaagtggactccaagtacaaaagtgtggagccgcatctgacttccacggagaag 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atggaggaagtggactccaagtacaaaagtgtggagccgcatctgacttccacggagaag 415
Query: 984 ccgaagctcgaacctcacgtcgacctgaagatgggcaagtgtttccacatgtcccgcgag 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ccgaagctcgaacctcacgtcgacctgaagatgggcaagtgtttccacatgtcccgcgag 475
Query: 1044 cactgtcccacggagaccaagtgcaagagagtggacccggtctccgtgttctgttgtgat 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cactgtcccacggagaccaagtgcaagagagtggacccggtctccgtgttctgttgtgat 535
Query: 1104 gtagacagcaccaggctgaaggaagccctggcgatcactgtgactcagaacaccgtcaac 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gtagacagcaccaggctgaaggaagccctggcgatcactgtgactcagaacaccgtcaac 595
Query: 1164 ctgcacgtgttgaacgccaccatcgaggagttggacgtgtcccagtccatcttccgtcgc 1223
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 596 ctgcacgtgttgaacgcca-catcgaggagttggacgtgtcccagtccatcttccgtctc 654
Query: 1224 ctcacatccatggcgctcactgacgggaacatcgggaggattgttg 1269
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 655 ctcacatccatggcgctcactgacggaaacatcgggaggattgttg 700
Score = 551 bits (278), Expect = e-156
Identities = 284/286 (99%)
Strand = Plus / Plus
Query: 244 ttgtcgagacccgtgcgttcagcgtccagtgattgtcatacgatcgacgaattaaacttc 303
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 12 ttgtcgagacccgtgcgttcagcgtccagtgattgtcacacgatcgacgaattaaacttc 71
Query: 304 tgtttacttcacaagtcgtttatattttccatattaaagtgaaaaatgatcaggtctcgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tgtttacttcacaagtcgtttatattttccatattaaagtgaaaaatgatcaggtctcgc 131
Query: 364 gagcgccgtttgtggcgcgctaaagcgtttattaaataccgatagactttgaaagttgtg 423
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 132 gagcgccgtttgtggcgcgctaaagcgtttattaaataccgatagacttcgaaagttgtg 191
Query: 424 aatagtttttgtggcaggccagtgtgcttggtttggcttaaaaattgtgcttcggttagc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aatagtttttgtggcaggccagtgtgcttggtttggcttaaaaattgtgcttcggttagc 251
Query: 484 tgtgggacaaagttaaaatgatatccagaaatagcttaattgacgt 529
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgtgggacaaagttaaaatgatatccagaaatagcttaattgacgt 297
Score = 121 bits (61), Expect = 7e-27
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1270 gccagttccctaagtactcgtccatcgcgtgcctgaacatctccaacaacaacctgagct 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gccagttccctaagtactcgtccatcgcgtgcctgaacatctccaacaacaacctgagct 796
Query: 1330 c 1330
|
Sbjct: 797 c 797
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 235,763
Number of extensions: 4045
Number of successful extensions: 4045
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4044
Number of HSP's successfully gapped: 6
Length of query: 2875
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2858
Effective length of database: 8,119,229
Effective search space: 23204756482
Effective search space used: 23204756482
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)