BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03261 (UTR included)
(1570 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B1C10 1455 0.0
>BF01044B1C10
Length = 783
Score = 1455 bits (734), Expect = 0.0
Identities = 766/776 (98%), Gaps = 3/776 (0%)
Strand = Plus / Plus
Query: 189 gttaagtctttccgatcaatttattagcaattattaattattaattaaagctcatataa- 247
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 8 gttaagtctttccgatcaatttattaatagttattaattattaattaaagctcatataat 67
Query: 248 --ccccaacacagaaaaaagtgcaacttacttcgcatattaaaattgtggaaaacgattt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aaccccaacacagaaaaaagtgcaacttacttcgcatattaaaattgtggaaaacgattt 127
Query: 306 ataaatactatttcgcgtctattttagaacagttacataacttatattgtttacgtgacg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ataaatactatttcgcgtctattttagaacagttacataacttatattgtttacgtgacg 187
Query: 366 ttaaatacttcaaatatgagtgtcgtttggagtgtcgcgataacgtctataaaaactctg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttaaatacttcaaatatgagtgtcgtttggagtgtcgcgataacgtctataaaaactctg 247
Query: 426 tttatcacaaagtcagtcaataatactaagttaatcaacagtgttcgtcgtttttctatc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttatcacaaagtcagtcaataatactaagttaatcaacagtgttcgtcgtttttctatc 307
Query: 486 acaccgcgttcaaatatgaagctagtacagtttgtttataatgaaaatccaggagaaatc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acaccgcgttcaaatatgaagctagtacagtttgtttataatgaaaatccaggagaaatc 367
Query: 546 cgcgccggttatctcgaaggcgacaaagtcgtggacataaacaaaacggattgcagtata 605
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cgcgccggttatcttgaaggcgacaaagtcgtggacataaacaaaacggattgcagtata 427
Query: 606 ccaagtactctgttggagatactaaagaacggtgacttggagaaagttaagaaactacca 665
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 428 ccaagtactctgttggagatactaaaaaacggtgacttggagaaagttaagaaactacca 487
Query: 666 cttatgaaaccaccctcaatagatctaagttccattaaattggcagcgccaatacatggc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cttatgaaaccaccctcaatagatctaagttccattaaattggcagcgccaatacatggc 547
Query: 726 catgacaaagtgctctgcatcggactcaattataaggatcactgcgaggagcagaatctg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 catgacaaagtgctctgcatcggactcaattataaggatcactgcgaggagcagaatctg 607
Query: 786 acaccaccccaagttccgatgattttcagcaagttcgccagcacagtggttggacccaag 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 acaccaccccaagttccgatgattttcagcaagttcgccagcacagtggttggacccaag 667
Query: 846 gacgctgtaaagctacggacagatgtcactaataaagtggattgggaagtcgaattaact 905
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 gacgctgtaaagctacggacagatgtcactaataaagtggactgggaagtcgaattaact 727
Query: 906 gtggtgatcggcaaacccgcgaacagagtcaaagctaaagatgcgtataaatatgt 961
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 728 gtggtgatcggcaaacccgcgaacagagtgaaagctaaagatgcgtataaatatgt 783
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,000
Number of extensions: 5482
Number of successful extensions: 5482
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5480
Number of HSP's successfully gapped: 1
Length of query: 1570
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1553
Effective length of database: 8,119,229
Effective search space: 12609162637
Effective search space used: 12609162637
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)