BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16459 (UTR included)
(2608 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028A2F10 1057 0.0
>BF01028A2F10
Length = 591
Score = 1057 bits (533), Expect = 0.0
Identities = 576/591 (97%), Gaps = 4/591 (0%)
Strand = Plus / Plus
Query: 700 ataactgtagagcgctgccgagggaggtcgatttggacgacgagatcacagccactgaga 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ataactgtagagcgctgccgagggaggtcgatttggacgacgagatcacagccacagaga 60
Query: 760 tctcggggaacgctctcaatgacggagctgattatgtttttccagcagtcccggaagtca 819
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 tcnnngggaacgctctcaatgacggagctgattatgtttttccagcagtcccggaagtta 120
Query: 820 gcagcgctgagagttcaagaatcggcccgatcggtatagagaataccgatttcgttttat 879
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 gcagcgctgagagttcaagaatcggccccatcggtatagagaataccgatttcgttttat 180
Query: 880 acgtcagtgcgttggagacaaatcggtgcaagcgcggactcaccgtggcttacgcgtccc 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgtcagtgcgttggagacaaatcggtgcaagcgcggactcaccgtggcttacgcgtccc 240
Query: 940 actgtcaacaggagtcgactttggatcgacccgtggctggtcacgcgaacttctgcccgg 999
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actgtcaacaggagtcggctttggatcgacccgtggctggtcacgcgaacttctgcccgg 300
Query: 1000 ccgaactctccactaaggcgcgcgatctgccatctctgctgtccacagtgaaacacgaga 1059
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 301 ccgaactctccactaaggcgcgcgatcttccatctctgctgtccacagtgaaacacgaga 360
Query: 1060 tgctacacgcgctaggcttcagtgtctcactgtttggcttctacagagacgacaacggcg 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctacacgcgctaggcttcagtgtctcactgtttggcttctacagagacgacaacggcg 420
Query: 1120 agccgctgacgccacgacgcaaggacaccgggaatccgccgcttgacgaac----agttg 1175
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 agccgctgacgccacgacgcaaggacaccgggaatccgccgcttgacgaacagtaagttg 480
Query: 1176 caaatccacaaatggtcggccaaagtcgtcaggaacgttacgaggaggaagtggatggtg 1235
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaatccacaagtggtcggccaaagtcgtcaggaacgttacgaggaggaagtggatggtg 540
Query: 1236 cgcggtggctacatggagaggacactgcagatggtggtgaccccacgcgtg 1286
||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgcggcggttacatggagaggacactgcagatggtggtgaccccacgcgtg 591
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 247,721
Number of extensions: 5010
Number of successful extensions: 5010
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5009
Number of HSP's successfully gapped: 1
Length of query: 2608
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2591
Effective length of database: 8,119,229
Effective search space: 21036922339
Effective search space used: 21036922339
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)