BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22339 (UTR included)
(3457 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B2A08 967 0.0
>BF01053B2A08
Length = 777
Score = 967 bits (488), Expect = 0.0
Identities = 503/508 (99%)
Strand = Plus / Plus
Query: 2147 caacgcgagcttttcgttgtccttgctcaattcgggcgagtctgcttactccgcgtgtgc 2206
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 13 caacgcgagcttttcgttgtccttgctcaattccggcgagtctgcttactccgcgtgtgc 72
Query: 2207 ccacgtgctcgtgtccggcgcccacgtgttccgacacccgagtacttgcacacgccctga 2266
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 73 ccacgtgctcgtgtccggcgcccacgtgttccgacatccgagtacttgcacacgccctga 132
Query: 2267 tcagacagaacaagtcatttgtaagccggcgagacctataaccactaatgatgtttggag 2326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcagacagaacaagtcatttgtaagccggcgagacctataaccactaatgatgtttggag 192
Query: 2327 aatcggagaaatacaaattgataccgatacattgacgagcgaagacgaaaacattaccat 2386
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 193 aatcggagaaatacaaattgataccgatacattgacgagcgaagatgaaaacattaccat 252
Query: 2387 aacatacgttgtatacagtcattgcaacaatcacgacgacagaaaaaaatatgaaaaaat 2446
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 253 aacatacgttgtatacagtcattgcaacaatcacgacgacagacaaaaatatgaaaaaat 312
Query: 2447 aatccgtctcggttacgacacagaaggaatcgttgtaaatggtatatccaatcctagtga 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aatccgtctcggttacgacacagaaggaatcgttgtaaatggtatatccaatcctagtga 372
Query: 2507 tttagtaaattttacttcagaggacgccgcaaagaaacagcagctggagcatgtctattt 2566
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 373 tttagtaaattttacttcagaggacgccgcaaagaaacagcagctggaacatgtctattt 432
Query: 2567 gatcacaaataacggcttaactcattgggttggtgttaaatgtgaagtcttacttgagaa 2626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gatcacaaataacggcttaactcattgggttggtgttaaatgtgaagtcttacttgagaa 492
Query: 2627 gagtccctacttcaattacagtgtgtct 2654
||||||||||||||||||||||||||||
Sbjct: 493 gagtccctacttcaattacagtgtgtct 520
Score = 208 bits (105), Expect = 4e-53
Identities = 117/121 (96%)
Strand = Plus / Plus
Query: 2656 tagatgacatcatacgcgctggaaacgcttacgtcgtgactaggcttgccgttttactga 2715
||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||
Sbjct: 657 tagatgacatcatacgcactgaaaacgcttacatcgtgactaagcttgccgttttactga 716
Query: 2716 aacaagaacgattagtccagaggttaacaacaaagttagctctagtatccacctctgctc 2775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aacaagaacgattagtccagaggttaacaacaaagttagctctagtatccacctctgctc 776
Query: 2776 c 2776
|
Sbjct: 777 c 777
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 470,412
Number of extensions: 11255
Number of successful extensions: 11255
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11255
Number of HSP's successfully gapped: 2
Length of query: 3457
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3439
Effective length of database: 8,109,745
Effective search space: 27889413055
Effective search space used: 27889413055
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)