BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12844 (UTR included)
(3736 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A2B09 1497 0.0
BF14_266_C1 597 e-170
>BF01009A2B09
Length = 801
Score = 1497 bits (755), Expect = 0.0
Identities = 786/798 (98%)
Strand = Plus / Plus
Query: 2128 ggattatttgtggcggcaaaggtgctggaaaatctacatatttgagataccaagtaaata 2187
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ggattatttgtggaggcaaaggtgctggannntctacatatttgagataccaagtaaata 60
Query: 2188 aattaatctctcaaggaccagttttagttgtggatcttgaccctgggcagtccgagttca 2247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattaatctctcaaggaccagttttagttgtggatcttgaccctgggcagtccgagttca 120
Query: 2248 cagtggccggtggtatatcagctactaccgtgtccgaaccactattagggccaagtttca 2307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagtggccggtggtatatcagctactaccgtgtccgaaccactattagggccaagtttca 180
Query: 2308 cacatctaaagaagccagacataatgtttaatatcggcatgataaacacaatggacaatg 2367
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 181 cacatctaaagaagccagacataatgtttaatatcggcttgataaacacaatggacaatg 240
Query: 2368 cgaggcgttatgttgcagcactgcagcaattgttatcacactgccgcaatcacaaaccgt 2427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgaggcgttatgttgcagcactgcagcaattgttatcacactgccgcaatcacaaaccgt 300
Query: 2428 actccgaaatgccgtggatagtcaacacaatggggatgacaaacttcctagggctcaagt 2487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actccgaaatgccgtggatagtcaacacaatggggatgacaaacttcctagggctcaagt 360
Query: 2488 tcataacacttatcgtaatattaacgcagccaacgtatcttctgcaatacgaatccaaga 2547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcataacacttatcgtaatattaacgcagccaacgtatcttctgcaatacgaatccaaga 420
Query: 2548 attctaaacgaagatttgaaagcttcttaagaccttccaacgtaaaacttgtattccaag 2607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attctaaacgaagatttgaaagcttcttaagaccttccaacgtaaaacttgtattccaag 480
Query: 2608 ataatgaaagcgatcccttgttcagcaacatcaccttcccggagcagttgaattataagt 2667
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 481 ataatgaaagcgatcccttgttcagcaacattaccttcccggagcagttgaattataaat 540
Query: 2668 ttgtagtggcagacgaggcggatagcttcttgaaaaatggctactctttatcacctagag 2727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgtagtggcagacgaggcggatagcttcttgaaaaatggctactctttatcacctagag 600
Query: 2728 acgaaagatacctaaatttcttggcctattttggtcaattactaactgtccacaaactaa 2787
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 601 acgaaagatacctaaatttcttggcctattttggtcaattactaactgtccacaaagtaa 660
Query: 2788 agagtttgcttgaaataacgccttatcaggtgaacttgaaagatatcaacgtcgctacca 2847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agagtttgcttgaaataacgccttatcaggtgaacttgaaagatatcaacgtcgctacca 720
Query: 2848 acgtgatcgtaatgaaggaacgtattacaaaagttatcaatggacaaatcgtggcactgt 2907
| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 721 atgtgatcgtaatgaaagaacgtattacaaaagttatcnntggacaaatcgtggcactgt 780
Query: 2908 gtcagctgttgagacaat 2925
||||||||||||||||||
Sbjct: 781 gtcagctgttgagacaat 798
>BF14_266_C1
Length = 1483
Score = 597 bits (301), Expect = e-170
Identities = 316/321 (98%), Gaps = 1/321 (0%)
Strand = Plus / Minus
Query: 3417 tagatacctttgatttataaatgctgtattaaa-ttttataaaagtcaaaaagtctagaa 3475
||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 1483 tagatacctttgatttataaatgctgtattaaaattntataaaagtcannnagtctagaa 1424
Query: 3476 aagaatagttaaaacatggggttctttaattactaataaattatattagcatgcaatata 3535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 aagaatagttaaaacatggggttctttaattactaataaattatattagcatgcaatata 1364
Query: 3536 accatatggaagttaaaatttcacacaaacaatagattacaataaaactgccttaaacaa 3595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 accatatggaagttaaaatttcacacaaacaatagattacaataaaactgccttaaacaa 1304
Query: 3596 ttagaatcagattgaatgtctcaaagacgagtctagctgacaggcacttagctgagttag 3655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 ttagaatcagattgaatgtctcaaagacgagtctagctgacaggcacttagctgagttag 1244
Query: 3656 aacagggcctgcgctccatgtcaaataaacttcctacataatttatacataactatttta 3715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 aacagggcctgcgctccatgtcaaataaacttcctacataatttatacataactatttta 1184
Query: 3716 ttgaaaaaaattaaaatacaa 3736
|||||||||||||||||||||
Sbjct: 1183 ttgaaaaaaattaaaatacaa 1163
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 497,582
Number of extensions: 10392
Number of successful extensions: 10392
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10391
Number of HSP's successfully gapped: 2
Length of query: 3736
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3718
Effective length of database: 8,109,745
Effective search space: 30152031910
Effective search space used: 30152031910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)