BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN00022 (UTR included)
         (1558 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_3412_C1                                                         1259   0.0  

>BF14_3412_C1
          Length = 686

 Score = 1259 bits (635), Expect = 0.0
 Identities = 656/663 (98%)
 Strand = Plus / Plus

                                                                        
Query: 476  ctgattcggaaaattaattcgcattatgataagcaacttcgataagttgtgtggagactt 535
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    ctgattcggaaatttaattcgcattatgataagcaacttcgataagttgtgtggagactt 61

                                                                        
Query: 536  agaaaaacaggaattagaggccccaaacggaatagcatcttcctccacatatgctcaact 595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   agaaaaacaggaattagaggccccaaacggaatagcatcttcctccacatatgctcaact 121

                                                                        
Query: 596  attagctatctatttatatcaaaatgatttatgtaatgctaaatatttatggaaaaggat 655
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  attagcaatctatttatatcaaaatgatttatgtaatgctaaatatttatggaaaaggat 181

                                                                        
Query: 656  tcctcagagtataacgagtagcaatcctgaaattccagctatttgggctgtaggacagaa 715
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 182  tcctcagagtataacgagtagcaatcctgaaattccagctatttgggctgtagggcagaa 241

                                                                        
Query: 716  gttatggaaaaaagatctcgccggaacttaccatgcactggctgcgttcacttggactga 775
            ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 242  gttatggaaaaaagatctcgccggaacataccatgcactggctgcattcacttggactga 301

                                                                        
Query: 776  gcctgtagctcatattatacgagctcttgaagaaagagttcgtgaaagagctttcaacct 835
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  gcctgtagctcatattatacgagctcttgaagaaagagttcgtgaaagagctttcaacct 361

                                                                        
Query: 836  cattggacgttcatacagcactgtttctcttgataccatagtgctcatgactggtctaag 895
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  cattggacgttcatacagcactgtttctcttgataccatagtgctcatgactggtctaag 421

                                                                        
Query: 896  tagagaggccgtgttacaaatatgtagagataagaaatgggagttgcattcagatggtgt 955
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 422  tagagaggccgtgttacaaatatgtagagataagaaatgggagttgcattcggatggtgt 481

                                                                        
Query: 956  aactataagccctacaccgccagtccaaccatctccattacatacctcaagtgaagacca 1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482  aactataagccctacaccgccagtccaaccatctccattacatacctcaagtgaagacca 541

                                                                        
Query: 1016 attgttcaagctcacagagtttgtatctttcttagaaaattagagttacatgttagattt 1075
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542  attgttcaagctcacagagtttgtatctttcttagaaaattagagttacatgttagattt 601

                                                                        
Query: 1076 acaatttctttaacaatttcaacttgtgttgccattgataaataaatacagcactcggaa 1135
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 602  acaatttctttaacaatttcaacttgtgttgccattgataaataaatacagcactctgaa 661

               
Query: 1136 gca 1138
            |||
Sbjct: 662  gca 664


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,458
Number of extensions: 10862
Number of successful extensions: 10862
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10862
Number of HSP's successfully gapped: 1
Length of query: 1558
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1541
Effective length of database: 8,119,229
Effective search space: 12511731889
Effective search space used: 12511731889
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)