BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01524 (UTR included)
(3190 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3438_C1 1703 0.0
>BF14_3438_C1
Length = 914
Score = 1703 bits (859), Expect = 0.0
Identities = 901/914 (98%), Gaps = 7/914 (0%)
Strand = Plus / Plus
Query: 2223 gaacaaatagagaatacaaagaaagaagaagagaaagatgtaaaagataaagatgacaaa 2282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaacaaatagagaatacaaagaaagaagaagagaaagatgtaaaagataaagatgacaaa 60
Query: 2283 gatagtagcgaaatagaaaaagatagtaaagaaaacgagattacacacacggagaagtca 2342
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 gatagtagcgaaatagaaaaagatagtaaagaaaacgagattacagacacggagaagtca 120
Query: 2343 gaggatgctaacacagaagttaatgaagcaaaag------ataaagataaagaagaagta 2396
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 gaggatgctaacacagaagttaatgaagcaaaagataaagataaagataaagaagaagta 180
Query: 2397 aacgaaaaggaagccgccgatgagacccaagataacgcagaaaaggaaagtgaaaaagac 2456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacgaaaaggaagccgccgatgagacccaagataacgcagaaaaggaaagtgaaaaagac 240
Query: 2457 aaagcacaaaacgattcagataaagataaacaagaaagtacagagtcagataaagataaa 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagcacaaaacgattcagataaagataaacaagaaagtacagagtcagataaagataaa 300
Query: 2517 aacgataaagatgttaaagaggtcaaaggaaagaacagcaaagaagacaagagtgaaaag 2576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacgataaagatgttaaagaggtcaaaggaaagaacagcaaagaagacaagagtgaaaag 360
Query: 2577 aaagaagaaaaagagaaagtcgaagatgaaccgagagcgaaacggacgagagagagtaag 2636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagaagaaaaagagaaagtcgaagatgaaccgagagcgaaacggacgagagagagtaag 420
Query: 2637 aagactgatccgccgccgcgttcaccgacgaaaagaaaagccaaaatgaattgataataa 2696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagactgatccgccgccgcgttcaccgacgaaaagaaaagccaaaatgaattgataataa 480
Query: 2697 gaaaaatatcacagaataaatatatcaaatataagcacgctaaccacgagttcgcattga 2756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaaaatatcacagaataaatatatcaaatataagcacgctaaccacgagttcgcattga 540
Query: 2757 cactacacacggagcgtcccgcgttgcacacattaatactaacctgaagatttatgactg 2816
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 541 cactacacacggagcgtcccgagttgcacacatcaatactaacctgaagatttatgactg 600
Query: 2817 agaaacggtcagcgctgcgtacagcgtgacaacgcgaactcggagtaagcgtaaagttat 2876
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaaacggttagcgctgcgtacagcgtgacaacgcgaactcggagtaagcgtaaagttat 660
Query: 2877 tactctattattaagttacgtttaatacgaggacaagaaaagtaaaatatatcgattgat 2936
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tactttattattaagttacgtttaatacgaggacaagaaaagtaaaatatatcgattgat 720
Query: 2937 tatcgattttgctcttaaacttgcgttgactctaaatagtttattcatgataagtttttt 2996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tatcgattttgctcttaaacttgcgttgactctaaatagtttattcatgataagtttttt 780
Query: 2997 tatataatgcacttatttctattaggtttttgtatataaaacaaaaa-atatttaggtgc 3055
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 781 tatataatgcacttatttctattaggtttttgtatataaaacaaaaatacatttaggtgc 840
Query: 3056 tatatgtaatgcctgcgttatatacatacatatatagaacgtaataattatatgaggatt 3115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tatatgtaatgcctgcgttatatacatacatatatagaacgtaataattatatgaggatt 900
Query: 3116 tcagtacttcgaat 3129
||||||||||||||
Sbjct: 901 tcagtacttcgaat 914
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 366,928
Number of extensions: 7382
Number of successful extensions: 7382
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7373
Number of HSP's successfully gapped: 2
Length of query: 3190
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3172
Effective length of database: 8,109,745
Effective search space: 25724111140
Effective search space used: 25724111140
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)