BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05051 (UTR included)
(1846 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_52_C1 1201 0.0
>BF14_52_C1
Length = 1859
Score = 1201 bits (606), Expect = 0.0
Identities = 642/652 (98%), Gaps = 4/652 (0%)
Strand = Plus / Plus
Query: 1 ttatttaagactgttcgatatttgagtgtttgatcgtttgccttggtctgatatttattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 ttatttaagactgttcgatatttgagtgtttgatcgtttgccttggtctgatatttattg 916
Query: 61 atcggtccccgcgccgacccaactcatcccatcgtgttcgttgtatctttaaaacgatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 atcggtccccgcgccgacccaactcatcccatcgtgttcgttgtatctttaaaacgatta 976
Query: 121 ttgaagacatattattattgagatgaaaataaaattaataaattgcgacgctatttatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 ttgaagacatattattattgagatgaaaataaaattaataaattgcgacgctatttatga 1036
Query: 181 atagacgacttctagtgtttaactcagatgacatatattatatatatatatataacttat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1037 atagacgacttctagtgtttaactcagatgacatatattatatatatatata--acttat 1094
Query: 241 aaatcatagtgtacattcagttgatctagacatgtatgacgttttattatcagacattaa 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1095 aaatcatagtgtacattcagttggtctagacatgtatgacgttttattatcagacattaa 1154
Query: 301 aa--aaaacctattctttaaacgttctatagagtatcgacgaccaagttaatgaacggaa 358
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 aaaaaaaacctattctttaaacgttctatagagtatcgacgaccaagttaatgaacggaa 1214
Query: 359 attgaaaattatatcgatgtaaccgcatttacataacgtagataactcgaccagtgattg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 attgaaaattatatcgatgtaaccgcatttacataacgtagataactcgaccagtgattg 1274
Query: 419 attcatcgtgaaacgtcgactccagctgtggcagtgtctgtgtggagctcggcaccgagt 478
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 atgcatcgtgaaccgtcgactccagctgtggcagtgtctgtgtggagctcggcaccgagt 1334
Query: 479 tcgttaggtgtaacttattgaaatgctcttaaccgactcggacgtcgctgtcggccatga 538
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1335 tcgttaggtgtaacttattgaaatgctcttaacagactccgacgtcgctgtcggccatga 1394
Query: 539 ccgcttatcattaatggttcacactgaatgtcattctacgttcgttacgctgagcgccga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 ccgcttatcattaatggttcacactgaatgtcattctacgttcgttacgctgagcgccga 1454
Query: 599 cagcgatctccgagtacataatatccttatgataaaaataattcaagatgta 650
|||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 cagcgacctccgagtacataatatccttatgataaaaataattcaagatgta 1506
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,716
Number of extensions: 9927
Number of successful extensions: 9927
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9923
Number of HSP's successfully gapped: 1
Length of query: 1846
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1829
Effective length of database: 8,119,229
Effective search space: 14850069841
Effective search space used: 14850069841
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)