BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16714 (UTR included)
(2113 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B2B08 545 e-155
>BF01039B2B08
Length = 782
Score = 545 bits (275), Expect = e-155
Identities = 417/459 (90%), Gaps = 9/459 (1%)
Strand = Plus / Minus
Query: 40 attcagtgacgtcacacacattgaggaatgttcacggatcgaagtattatatgtgtgtg- 98
||||||||||| |||||||| ||| | ||||||||||| || ||||||||||||||||
Sbjct: 468 attcagtgacgacacacacacggagtagtgttcacggattgatgtattatatgtgtgtgt 409
Query: 99 -agttgtggtagtgtgtgtgatgtttaacattcagtgacgtcacacacattgaggaatgt 157
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||
Sbjct: 408 gagtcgtggtagtgtgtgtgatgtttaacattcagtgacgacacacacatcgaggagtgt 349
Query: 158 tcacggatcgaagtattatatgtgtgtg--agttgtggtagtgtgtgtgatgtttaacat 215
||||||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 348 tcacggatcgatgtattatatgtgtgtgtgagtcgtggtagtgtgtatgatgtttaacat 289
Query: 216 tcagtgacgtcacacacattgaggaatgttcacggatcgaagtattatatgtgtgtg--a 273
||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |
Sbjct: 288 tcagtgacgacacacacattgaggagtgttcacggatcgatgtattatatgtgtgtgtga 229
Query: 274 gttgtggtagtgtgtgtgatgtttaacattcagtgacgtcacacacattgaggaatgttc 333
|| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||| |||||
Sbjct: 228 gtcgtggtagtgtgtgtgatctttaacattcagtgacgacacacgcattgaggagtgttc 169
Query: 334 acggatcgaagtattatatgtgtgtgagttgtggtagtgtgtgtgatgtttaacattcag 393
||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 168 acggatcgatgtattatgtgtgtgtgagtcgtggtagtgtgtgtgatgtttaacattcag 109
Query: 394 tgacgtcacacacattgaggaatgttcacggatcgaagtattatatgtg--tgtgagttg 451
||||| |||||||| ||||| |||||||||||||| |||||||||||| ||||||| |
Sbjct: 108 tgacgagacacacatagaggagtgttcacggatcgatgtattatatgtgtgtgtgagtcg 49
Query: 452 tggtagtgtgtgtgat-tttaacatttagtgacgtcaca 489
|||||||||||||||| ||||||||| ||||||| ||||
Sbjct: 48 tggtagtgtgtgtgatgtttaacattcagtgacgacaca 10
Score = 541 bits (273), Expect = e-153
Identities = 375/406 (92%), Gaps = 6/406 (1%)
Strand = Plus / Minus
Query: 4 tgtgtgtgagttgtggtagtgtgtgtgatgtttaacattcagtgacgtcacacacattga 63
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 415 tgtgtgtgagtcgtggtagtgtgtgtgatgtttaacattcagtgacgacacacacatcga 356
Query: 64 ggaatgttcacggatcgaagtattatatgtg--tgtgagttgtggtagtgtgtgtgatgt 121
||| |||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||
Sbjct: 355 ggagtgttcacggatcgatgtattatatgtgtgtgtgagtcgtggtagtgtgtatgatgt 296
Query: 122 ttaacattcagtgacgtcacacacattgaggaatgttcacggatcgaagtattata--tg 179
|||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 295 ttaacattcagtgacgacacacacattgaggagtgttcacggatcgatgtattatatgtg 236
Query: 180 tgtgtgagttgtggtagtgtgtgtgatgtttaacattcagtgacgtcacacacattgagg 239
||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 235 tgtgtgagtcgtggtagtgtgtgtgatctttaacattcagtgacgacacacgcattgagg 176
Query: 240 aatgttcacggatcgaagtattatatgtgtgtgagttgtggtagtgtgtgtgatgtttaa 299
| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 175 agtgttcacggatcgatgtattatgtgtgtgtgagtcgtggtagtgtgtgtgatgtttaa 116
Query: 300 cattcagtgacgtcacacacattgaggaatgttcacggatcgaagtattata--tgtgtg 357
|||||||||||| |||||||| ||||| |||||||||||||| |||||||| ||||||
Sbjct: 115 cattcagtgacgagacacacatagaggagtgttcacggatcgatgtattatatgtgtgtg 56
Query: 358 tgagttgtggtagtgtgtgtgatgtttaacattcagtgacgtcaca 403
||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 55 tgagtcgtggtagtgtgtgtgatgtttaacattcagtgacgacaca 10
Score = 476 bits (240), Expect = e-134
Identities = 364/401 (90%), Gaps = 7/401 (1%)
Strand = Plus / Minus
Query: 127 attcagtgacgtcacacacattgaggaatgttcacggatcgaagtattatatgtgtgtg- 185
||||||||||| |||||||| ||| | ||||||||||| || ||||||||||||||||
Sbjct: 468 attcagtgacgacacacacacggagtagtgttcacggattgatgtattatatgtgtgtgt 409
Query: 186 -agttgtggtagtgtgtgtgatgtttaacattcagtgacgtcacacacattgaggaatgt 244
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||
Sbjct: 408 gagtcgtggtagtgtgtgtgatgtttaacattcagtgacgacacacacatcgaggagtgt 349
Query: 245 tcacggatcgaagtattatatgtgtgtg--agttgtggtagtgtgtgtgatgtttaacat 302
||||||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 348 tcacggatcgatgtattatatgtgtgtgtgagtcgtggtagtgtgtatgatgtttaacat 289
Query: 303 tcagtgacgtcacacacattgaggaatgttcacggatcgaagtattatatgtgtgtg--a 360
||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |
Sbjct: 288 tcagtgacgacacacacattgaggagtgttcacggatcgatgtattatatgtgtgtgtga 229
Query: 361 gttgtggtagtgtgtgtgatgtttaacattcagtgacgtcacacacattgaggaatgttc 420
|| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||| |||||
Sbjct: 228 gtcgtggtagtgtgtgtgatctttaacattcagtgacgacacacgcattgaggagtgttc 169
Query: 421 acggatcgaagtattatatgtgtgtgagttgtggtagtgtgtgtgat-tttaacatttag 479
||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||| ||
Sbjct: 168 acggatcgatgtattatgtgtgtgtgagtcgtggtagtgtgtgtgatgtttaacattcag 109
Query: 480 tgacgtcacacacattgaggaatgttcacggatcgatgtat 520
||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 108 tgacgagacacacatagaggagtgttcacggatcgatgtat 68
Score = 373 bits (188), Expect = e-103
Identities = 295/325 (90%), Gaps = 8/325 (2%)
Strand = Plus / Minus
Query: 214 attcagtgacgtcacacacattgaggaatgttcacggatcgaagtattatatgtgtgtg- 272
||||||||||| |||||||| ||| | ||||||||||| || ||||||||||||||||
Sbjct: 468 attcagtgacgacacacacacggagtagtgttcacggattgatgtattatatgtgtgtgt 409
Query: 273 -agttgtggtagtgtgtgtgatgtttaacattcagtgacgtcacacacattgaggaatgt 331
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||
Sbjct: 408 gagtcgtggtagtgtgtgtgatgtttaacattcagtgacgacacacacatcgaggagtgt 349
Query: 332 tcacggatcgaagtattatatgtgtgtg--agttgtggtagtgtgtgtgatgtttaacat 389
||||||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 348 tcacggatcgatgtattatatgtgtgtgtgagtcgtggtagtgtgtatgatgtttaacat 289
Query: 390 tcagtgacgtcacacacattgaggaatgttcacggatcgaagtattatatgtgtgtg--a 447
||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |
Sbjct: 288 tcagtgacgacacacacattgaggagtgttcacggatcgatgtattatatgtgtgtgtga 229
Query: 448 gttgtggtagtgtgtgtgat-tttaacatttagtgacgtcacacacattgaggaatgttc 506
|| ||||||||||||||||| ||||||||| ||||||| ||||| ||||||||| |||||
Sbjct: 228 gtcgtggtagtgtgtgtgatctttaacattcagtgacgacacacgcattgaggagtgttc 169
Query: 507 acggatcgatgta-tatgtgtgtgt 530
||||||||||||| |||||||||||
Sbjct: 168 acggatcgatgtattatgtgtgtgt 144
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,525
Number of extensions: 5645
Number of successful extensions: 5645
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5614
Number of HSP's successfully gapped: 7
Length of query: 2113
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2096
Effective length of database: 8,119,229
Effective search space: 17017903984
Effective search space used: 17017903984
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)