BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19053 (UTR included)
(1399 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1C08 955 0.0
>BF01011B1C08
Length = 517
Score = 955 bits (482), Expect = 0.0
Identities = 485/486 (99%)
Strand = Plus / Plus
Query: 163 gacccttcggctgcctaatagagctttatcgaacaacgtgccttagtatattttctttaa 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 gacccttcggctgcctaatagagctttatcgaacaacgtgccttagtatattttctttaa 91
Query: 223 cccccgtaaattagacacagctcattgataactttagccttataactattgtccacatga 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 cccccgtaaattagacacagctcattgataactttagccttataactattgtccacatga 151
Query: 283 caaatattcggtccaaatctgtccatgataataatatacgtatatatttaataaaagaaa 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 caaatattcggtccaaatctgtccatgataataatatacgtatatatttaataaaagaaa 211
Query: 343 tgggtgatatgaaacgaagtgccaatatatgccaaataaatatataaaactgagaagaat 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tgggtgatatgaaacgaagtgccaatatatgccaaataaatatataaaactgagaagaat 271
Query: 403 agtttgtttgtgtggatggtgttgttaggatgtcagtgtggtcgggcggtgaggtccgcg 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agtttgtttgtgtggatggtgttgttaggatgtcagtgtggtcgggcggtgaggtccgcg 331
Query: 463 cgccgcccgcggccactatcccatcagcaaacacctccatggagtccgggatcgaggcgg 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cgccgcccgcggccactatcccatcagcaaacacctccatggagtccgggatcgaggcgg 391
Query: 523 gagtgctaccaacggtcacgggatcgctcgcctctgctagggattcgttgggatcgctat 582
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 392 gagtgctaccaacggtcacgggatcactcgcctctgctagggattcgttgggatcgctat 451
Query: 583 cccgggctgcggaaccagtctacgacaccgaccacacggacctgggttcggaattggacg 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cccgggctgcggaaccagtctacgacaccgaccacacggacctgggttcggaattggacg 511
Query: 643 aggcgg 648
||||||
Sbjct: 512 aggcgg 517
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 183,296
Number of extensions: 4337
Number of successful extensions: 4337
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4337
Number of HSP's successfully gapped: 1
Length of query: 1399
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1382
Effective length of database: 8,119,229
Effective search space: 11220774478
Effective search space used: 11220774478
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)