BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12163 (UTR included)
(2938 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2121_C1 496 e-139
>BF14_2121_C1
Length = 807
Score = 496 bits (250), Expect = e-139
Identities = 318/337 (94%), Gaps = 4/337 (1%)
Strand = Plus / Minus
Query: 2604 tatcattgcaataaaagtctataaaagtgttttaactaggaatacagataattgctatat 2663
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 807 tatcattgcaataaaagtctataaaagtgttttaactaggaatacagattattgctatat 748
Query: 2664 taaattagatgttagatcctaattcaattag-cgcggaggagcaggat-tgggcccgtct 2721
|||| |||||| ||||||||||| | ||| |||| | | |||||||||||
Sbjct: 747 taaaatagatggtagatcctaat--agttaatcgcgcctcctcgtcctatgggcccgtct 690
Query: 2722 ttctctccaatggcttgttttaactctgttataattgtcatggccgtctctaggtctgta 2781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttctctccaatggcttgttttaactctgttataattgtcatggccgtctctaggtctgta 630
Query: 2782 gtcgtcgcgattatgaaatttctctttagacctatatggatggtgtcggttagaccaatt 2841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtcgtcgcgattatgaaatttctctttagacctatatggatggtgtcggttagaccaatt 570
Query: 2842 accctgcaaactagcaactacaagtttgtcgctcatgtcttgtctctgtgtgggtaagtg 2901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 accctgcaaactagcaactacaagtttgtcgctcatgtcttgtctctgtgtgggtaagtg 510
Query: 2902 ggctggttggggattttcctccttaagcttatcagtc 2938
|||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggctggttggggattttcctccttaagcttatcagtc 473
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,696
Number of extensions: 5992
Number of successful extensions: 5992
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5992
Number of HSP's successfully gapped: 2
Length of query: 2938
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2920
Effective length of database: 8,109,745
Effective search space: 23680455400
Effective search space used: 23680455400
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)