BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16686 (UTR included)
(1783 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2F08 985 0.0
>BF01054B2F08
Length = 705
Score = 985 bits (497), Expect = 0.0
Identities = 506/509 (99%)
Strand = Plus / Plus
Query: 708 atgttcattgttgaaaagacacaagagaattcagaatcagccaaacagcaagcattgtat 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atgttcattgttgaaaagacacaagagaattcagaatcagccaaacagcaagcattgtat 256
Query: 768 tggtacaaggaatatttatttggcttcttactaaatctaacatcagtacaattcattaag 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tggtacaaggaatatttatttggcttcttactaaatctaacatcagtacaattcattaag 316
Query: 828 ttcctcgttggatcaccgagaccccatttctttgatacatgccgtccagtagaggcagag 887
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 317 ttcctcgttggatcaccgagaccccatttctttgatacatgccgtccagtagaggcggag 376
Query: 888 acgtgcacagagtcacagtacatatatagttatcagtgtacgaacccggcttggatcaat 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 acgtgcacagagtcacagtacatatatagttatcagtgtacgaacccggcttggatcaat 436
Query: 948 caatcggacaccagcttcccctcggggcattcctcattggcgttccactctgctctcttt 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 caatcggacaccagcttcccctcggggcattcctcattggcgttccactctgctctcttt 496
Query: 1008 attgtttactacttgtatcaaaggaagacattgtgtaaaaacacattagtgacccagtcc 1067
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 497 attgtttactacttgtatcaaaggaagacgttgtgtaaaaacactttagtgacccagtcc 556
Query: 1068 ctctgcgtgctgctgtccgggtactgcgccgtgtcccggttgtcggatcaccgtcatcac 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctctgcgtgctgctgtccgggtactgcgccgtgtcccggttgtcggatcaccgtcatcac 616
Query: 1128 tggtgggacgtggtcgcgggcttcgtcatagccatcgttgtattgatttatactatattc 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tggtgggacgtggtcgcgggcttcgtcatagccatcgttgtattgatttatactatattc 676
Query: 1188 catttatgcggaaactttaaatgtgtgat 1216
|||||||||||||||||||||||||||||
Sbjct: 677 catttatgcggaaactttaaatgtgtgat 705
Score = 281 bits (142), Expect = 2e-75
Identities = 157/162 (96%)
Strand = Plus / Plus
Query: 495 ttaaaaatgttaaataaatttaaatatttctgggggaaaacgaatcgatggcatcgagtt 554
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 35 ttaaaaatgttaaataaatttaaatacttctgggggaaaacgaatcgatggcatcgagtt 94
Query: 555 ttcctcatatttctcataatcgagttaaggatattgcccggtggtaaatatggttttaaa 614
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
Sbjct: 95 ttcctcatatttctcatagtcgagttaaggatattccccggtggtaaatatggttttaga 154
Query: 615 tgcaacgacccagcactctcccacacatttaccggagacact 656
|||||||| |||||||||||||||||||||||||||||||||
Sbjct: 155 tgcaacgatccagcactctcccacacatttaccggagacact 196
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,155
Number of extensions: 5233
Number of successful extensions: 5233
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5233
Number of HSP's successfully gapped: 2
Length of query: 1783
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1766
Effective length of database: 8,119,229
Effective search space: 14338558414
Effective search space used: 14338558414
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)