BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14785 (UTR included)
(2140 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B2F08 1271 0.0
>BF01019B2F08
Length = 649
Score = 1271 bits (641), Expect = 0.0
Identities = 647/649 (99%)
Strand = Plus / Plus
Query: 522 gaaaaaactgttgcagaagacttggttgtaaccaagtataaattagcggggcaaattgtt 581
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gaaaaaactgttgcagaagacttggttgtaaccaactataaattagcggggcaaattgtt 60
Query: 582 aaccgtgttttagaacaagtgattgctaaatgcataccagaggcgtctgcacgtgaaata 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaccgtgttttagaacaagtgattgctaaatgcataccagaggcgtctgcacgtgaaata 120
Query: 642 tgtgaatttggtgacaaattgttgcttgacgaaacttctaaagtcttcaaaaaagagaaa 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtgaatttggtgacaaattgttgcttgacgaaacttctaaagtcttcaaaaaagagaaa 180
Query: 702 gattccaaaaaaggcatcgcattttcgacatgcgtatctgtaaacaattgtatatgtcac 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gattccaaaaaaggcatcgcattttcgacatgcgtatctgtaaacaattgtatatgtcac 240
Query: 762 ttttctccaataccaagtgaaacggattacatcctgaaagagggtgatttagctaaaatt 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttctccaataccaagtgaaacggattacatcctgaaagagggtgatttagctaaaatt 300
Query: 822 gaccttggagctcatatagatggcttcatagcagtggtagcacatacagtggtggtaggc 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaccttggagctcatatagatggcttcatagcagtggtagcacatacagtggtggtaggc 360
Query: 882 ggcggtgaggtcactggtagagcagctgatgtcttactagctgctcactatgcaagtgaa 941
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtggtgaggtcactggtagagcagctgatgtcttactagctgctcactatgcaagtgaa 420
Query: 942 gctgctttgagactcctcagacctagcaatgagaactatgctatcactgatgttgttcaa 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctgctttgagactcctcagacctagcaatgagaactatgctatcactgatgttgttcaa 480
Query: 1002 aagataagcgcagagtatggctgtaagccgatagagggtatgttatcccatcagctgaaa 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagataagcgcagagtatggctgtaagccgatagagggtatgttatcccatcagctgaaa 540
Query: 1062 cagttcagaattgatggagagaaaagcattatccagaatccatcagaagcacaacggaag 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagttcagaattgatggagagaaaagcattatccagaatccatcagaagcacaacggaag 600
Query: 1122 gaacatgaaaaggctacttttgaaacttatgaagtttatgctatggatg 1170
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaacatgaaaaggctacttttgaaacttatgaagtttatgctatggatg 649
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 315,992
Number of extensions: 22070
Number of successful extensions: 22070
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22070
Number of HSP's successfully gapped: 1
Length of query: 2140
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2123
Effective length of database: 8,119,229
Effective search space: 17237123167
Effective search space used: 17237123167
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)