BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19389 (UTR included)
(3253 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2979_C1 1653 0.0
>BF14_2979_C1
Length = 898
Score = 1653 bits (834), Expect = 0.0
Identities = 881/897 (98%), Gaps = 1/897 (0%)
Strand = Plus / Plus
Query: 1929 gttcaggtatctgggcccacagcagagactgccactccatccacatccaaacaagccttc 1988
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gttcaggtatccgggcccacagcagagactgccactccatccacatccaaacaagccttc 61
Query: 1989 agggctcccgatgcacctaaaa-aaccacagagggcttccccaacaccaccggtagacac 2047
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 62 agggctcccgatgcacctaaaaaaaccacagagggcttccccaacaccaccggtagacac 121
Query: 2048 caaagcgctcattgaagcctcaaagaatctgacacagaagttgaagaagttgtcgaagga 2107
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caaagcactcattgaagcctcaaagaatctgacacagaagttgaagaagttgtcgaagga 181
Query: 2108 ggtgttaacaaacaaagtagatctcaaagctgtagaggagccggtgcgtgcgaaagtacg 2167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggtgttaacaaacaaagtagatctcaaagctgtagaggagccggtgcgtgcgaaagtacg 241
Query: 2168 tcccggagctgtgatagagtccatgaagcatcatggcaaaggaatatattcagggacgtt 2227
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcctggagctgtgatagagtccatgaagcatcatggcaaaggaatatattcagggacgtt 301
Query: 2228 ctctggaacactgaatccagctcttcaagacagatacggccgaccaaagagagatatatc 2287
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctcaggaacactgaatccagctcttcaagacagatacggccgaccaaagagagatatatc 361
Query: 2288 cacgataatccacatcttgaatgatctgttgtgtgcgacgccacccatagccttagcgca 2347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cacgataatccacatcttgaatgatctgttgtgtgcgacgccacccatagccttagcgca 421
Query: 2348 gaaggagccgaagcattcttgcgtgacggtcactcaggaggagccgagcaagtacagcgg 2407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaaggagccgaagcattcttgcgtgacggtcactcaggaggagccgagcaagtacagcgg 481
Query: 2408 ttgtcacacgtgttcgtacggacattgcgacggacatccgaccagcaagaactgtgtgtg 2467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgtcacacgtgttcgtacggacattgcgacggacatccgaccagcaagaactgtgtgtg 541
Query: 2468 tgataaagactgtcagtgtagtcgtctagaacctaacgtgtgtgcgtcctgtgacgagaa 2527
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 542 tgataaagactgtcagtgtagtcgtctagaacctaacgtatgtgcgtcctgtgacgagaa 601
Query: 2528 aaccagcccgggggagctctgcaagaagtgcgacaaagcgaagacgttcgctctggagaa 2587
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 602 aaccagcccgggggagctctgcaagaaatgcgacaaagcgaagacgttcgctctggagaa 661
Query: 2588 ctcgaagactaaatgcaaactggaacagctgaggctcgtcatgcaacagacgaagcaacg 2647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctcgaagactaaatgcaaactggaacagctgaggctcgtcatgcaacagacgaagcaacg 721
Query: 2648 acgcgaggcgcgcaagttaaaaacattaccttacaccacgccttccaagacacacgcctc 2707
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 722 acgcgaggcgcgcaagttaaaaacattaccttacaccacgccttccaagacacacgccgc 781
Query: 2708 aaatgataccacatccatcaaagaagagatcgaaacggccgcataatacacacagccgcg 2767
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 782 caatgataccacatccatcnnngaagagatcgaaacggccgcataatacacccagccgcg 841
Query: 2768 gtccagggttgctagtgcgctggggacggggagattatattaattttaacataatcg 2824
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 842 gtccagggttgctagtgcgctggggacnnggaggttatattaattttaacataatcg 898
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 385,997
Number of extensions: 7582
Number of successful extensions: 7582
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7581
Number of HSP's successfully gapped: 1
Length of query: 3253
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3235
Effective length of database: 8,109,745
Effective search space: 26235025075
Effective search space used: 26235025075
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)