BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10410 (UTR included)
(2029 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A2F11 1360 0.0
>BF01020A2F11
Length = 714
Score = 1360 bits (686), Expect = 0.0
Identities = 707/714 (99%)
Strand = Plus / Plus
Query: 663 gtgtctcttcatcctctggtcataatgaatgtttctgaacattggacccgtttacgtgct 722
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gtgtctcttcatcctctggtcataatgaatgcttctgaacattggacccgtttacgtgct 60
Query: 723 caggagggatcaccccagactgttataggagctctaataggcaaacaaaaaggacggaat 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caggagggatcaccccagactgttataggagctctaataggcaaacaaaaaggacggaat 120
Query: 783 atagaagtaatgaattcatttgaacttgtcttcagtgttatagatggagacattattata 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atagaagtaatgaattcatttgaacttgtcttcagtgttatagatggagacattattata 180
Query: 843 gatagagattattacaatttaaaagaagaacaatttaagcaagtattctcggatatggac 902
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatagagattattataatttaaaagaagaacaatttaagcaagtattctcggatatggac 240
Query: 903 ttccttggatggtatacaacaggcgaggtacccactgaaagggacattgctgttcatcgt 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttccttggatggtatacaacaggcgaggtacccactgaaagggacattgctgttcatcgt 300
Query: 963 cagatctgtgacatcaatgaatgtccagtcatgttgatgttaaacccggcagggcggaag 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagatctgtgacatcaatgaatgtccagtcatgttgatgttaaacccggcagggcggaag 360
Query: 1023 ggtgatcaattaccagtagttttatatgaatcggtgatagatgttgtgaatggacatgct 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtgatcaattaccagtagttttatatgaatcggtgatagatgttgtgaatggacatgct 420
Query: 1083 actatgctcctcgcaccactcacatacactttggctgctgaggaagctgaaaggatcgga 1142
|||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||
Sbjct: 421 actatgctcctcgcaccactcacacacactttggctgctgaggaggctgaaaggattgga 480
Query: 1143 gtggatcatgtagcgagggtgtcatccggtgaagctgctctaaatagtttagttgcggaa 1202
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtggatcatgtagcaagggtgtcatccggtgaagctgctctaaatagtttagttgcggaa 540
Query: 1203 cacctaacagctcaacggtcggccatcaagatgttggtgtcccgtgtgcgtgctgttctg 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cacctaacagctcaacggtcggccatcaagatgttggtgtcccgtgtgcgtgctgttctg 600
Query: 1263 gccactgtacgtgcggtccgagacggagccctaccgccgcggcccgctctgctgcgtgag 1322
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 601 gccactgtacgtgcggtccgagacggagccctgccgccgcggcccgctctgctgcgtgag 660
Query: 1323 gcccgcgctctcgccaacagattgccgcttctaacttcacagcagttccgaaca 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcccgcgctctcgccaacagattgccgcttctaacttcacagcagttccgaaca 714
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,608
Number of extensions: 7435
Number of successful extensions: 7435
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7435
Number of HSP's successfully gapped: 1
Length of query: 2029
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2012
Effective length of database: 8,119,229
Effective search space: 16335888748
Effective search space used: 16335888748
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)