BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17013 (UTR included)
(1825 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2383_C1 1459 0.0
>BF14_2383_C1
Length = 765
Score = 1459 bits (736), Expect = 0.0
Identities = 757/764 (99%)
Strand = Plus / Plus
Query: 377 ttgctaatttgacttctgttacccacaaaaaattaaataacatcttattacctttcttta 436
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2 ttgctaatttgacttctgttaccaacaaaaaattaaataacatcttattacctttcctta 61
Query: 437 tattacaaataaaacctttttacttctttagtaatttaaaggatagtaatatttattttt 496
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tattacaaataaaaccttttcacttctttagtaatttaaaggatagtaatatttattttt 121
Query: 497 cactatgaatccaatgtcgatggacagagatgaaccaacttctttgtcatcggtttccac 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cactatgaatccaatgtcgatggacagagatgaaccaacttctttgtcatcggtttccac 181
Query: 557 aaaccatcccttagaacagttcatattgcttgccaaaggtgctaaggggtcagcatgtgc 616
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 182 aaaccatcccttagaacagttcatattgcttgccaaaggtgctaagggttcagcatgtgc 241
Query: 617 ggaactaattaaacaggttcttgaagctccaggagtgcatgttttcggagaacttttaga 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggaactaattaaacaggttcttgaagctccaggagtgcatgttttcggagaacttttaga 301
Query: 677 aatgccaaacataaaagagttggagacaggaccttatgcgacacattttaaaactctcaa 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aatgccaaacataaaagagttggagacaggaccttatgcgacacattttaaaactctcaa 361
Query: 737 tttgtttgcatatggtacttataaagactatttagaaaataaacctgaatacttagaact 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tttgtttgcatatggtacttataaagactatttagaaaataaacctgaatacttagaact 421
Query: 797 aaatcctgtacaatgtaaaaagttacaacatttaacaatagcaactttggctactcaaga 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaatcctgtacaatgtaaaaagttacaacatttaacaatagcaactttggctactcaaga 481
Query: 857 aaaatgtataccatacagtgtgcttctagaagaattagacatcaagaatgttagggattt 916
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 482 aaaatgtataccatacagtgtgcttctagaagaattagacattaagaatgttagggattt 541
Query: 917 ggaggatttaattattgaagccatttatgcagatataatccatggaaagctggaccaaga 976
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 542 ggaggatttaattattgaagccatttatgcagatataatccatggaaagcttgaccaaga 601
Query: 977 atgtaagcgtgtagaggtggatgtcgcattaggacgggatgctcggttagaagatgctgc 1036
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atgtaagcgtgtagaagtggatgtcgcattaggacgggatgctcggttagaagatgctgc 661
Query: 1037 agccatagctgatgtgttagcggactggtgtaatgcctgtgaaactgtcctcaactcagt 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agccatagctgatgtgttagcggactggtgtaatgcctgtgaaactgtcctcaactcagt 721
Query: 1097 ggatcgacatatacagagggccaaccaccataaacaacggtcta 1140
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ggatcgacatatacagagggccaaccaccataaacaacggtcta 765
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,841
Number of extensions: 6504
Number of successful extensions: 6504
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6504
Number of HSP's successfully gapped: 1
Length of query: 1825
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1808
Effective length of database: 8,119,229
Effective search space: 14679566032
Effective search space used: 14679566032
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)