BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02826 (UTR included)
(1148 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A1A09 1043 0.0
>BF01020A1A09
Length = 654
Score = 1043 bits (526), Expect = 0.0
Identities = 536/540 (99%)
Strand = Plus / Plus
Query: 491 cttctaaacaatgcctaaagttcgccgcagtcgtaaacctccaccagatggttgggaatt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 cttctaaacaatgcctaaagttcgccgcagtcgtaaacctccaccagatggttgggaatt 102
Query: 551 aatcgaaccgacccttgaggaattagaacagaaaatgagagaagctgaaaccgaaccaca 610
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 103 aatcgaaccgacccttgaggaattagaacagaaaatgagagaagctgaaactgaaccaca 162
Query: 611 tgaagggaaaaggaaacaagaatcactttggcccatcttcaaaatacatcaccagaagtc 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tgaagggaaaaggaaacaagaatcactttggcccatcttcaaaatacatcaccagaagtc 222
Query: 671 acgctacatatatgacttattttaccgacgaaaagctatcagtagagaattatatcaata 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 acgctacatatatgacttattttaccgacgaaaagctatcagtagagaattatatcaata 282
Query: 731 ttgtttaaatgaaaaaattgcagatgcaaatctaatagccaaatggaagaagactggtta 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttgtttaaatgaaaaaattgcagatgcaaatctaatagccaaatggaagaagactggtta 342
Query: 791 tgaaaatctatgctgtctgcgatgtatacaaactagagatacaaattttgccacaaactg 850
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tgaaaatttatgctgtctgcgatgtatacaaactagagatacaaattttgccacaaactg 402
Query: 851 tatatgcagagtgccaaagagtaagctagaggaaggtaggatcgttgaatgtgtgcattg 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tatatgcagagtgccaaagagtaagctagaggaaggtaggatcgttgaatgtgtgcattg 462
Query: 911 cggctgccgagggtgttcaggatagtatatcctacacatgtgtataactatggtgttaat 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cggctgccgagggtgttcaggatagtatatcctacacatgtgtataactatggtgttaat 522
Query: 971 gtatatgttactgtaaaagctccaactatagtaaatcttaagatttaagtatgatatgaa 1030
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 523 gtatatgttactgtaaaagctccaactatagtaaatcttnngatttaagtatgatatgaa 582
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 185,336
Number of extensions: 4695
Number of successful extensions: 4695
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4695
Number of HSP's successfully gapped: 1
Length of query: 1148
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1131
Effective length of database: 8,119,229
Effective search space: 9182847999
Effective search space used: 9182847999
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)