BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19947 (UTR included)
(1400 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1D02 246 8e-65
BF01023A2A12 232 1e-60
BF01052B1H02 206 7e-53
BF01037B1H08 186 6e-47
BF01029B2F12 182 1e-45
BF01010B2F09 151 4e-36
BF01031B1E12 115 2e-25
BF01040A1G09 98 5e-20
BF01062A1B01 90 1e-17
>BF01056B1D02
Length = 778
Score = 246 bits (124), Expect = 8e-65
Identities = 200/220 (90%), Gaps = 9/220 (4%)
Strand = Plus / Plus
Query: 1179 aagtcgtggtggcctggaggttaaaggaccgcctctcatgcgtgagggcgcgggttcgaa 1238
||||||||||||||||||||||||||| ||||| ||| |||||||||||||||| |||
Sbjct: 457 aagtcgtggtggcctggaggttaaagg-ccgcccatca--cgtgagggcgcgggtt-gaa 512
Query: 1239 acctggcaagtaccaatgtgat-ttttcatagtcatacgtactttctaatagtatttaga 1297
|||||||||||||||||||||| ||||| ||||||| ||||||||||| ||| |||||
Sbjct: 513 acctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagggtagttaga 572
Query: 1298 caccactgacgaacggtgaaggaaaacatcgtgaggaaacctggacttataatttcaaat 1357
||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 573 caccactgacg----gtgaaggaaaacgtcgtgaggaaacctggtcttataatttcaaat 628
Query: 1358 tataagtttgaaatcgccaacccgtcttgagcaagcgtgg 1397
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 629 tataagattgaaatcgccaacccgtcttgagcaagcgtgg 668
>BF01023A2A12
Length = 723
Score = 232 bits (117), Expect = 1e-60
Identities = 198/220 (90%), Gaps = 5/220 (2%)
Strand = Plus / Plus
Query: 1179 aagtcgtggtggcctggaggttaaaggaccgcctctcatgcgtgagggcgcgggttcgaa 1238
|||||||||||||||| |||||||||| ||||| ||| |||||||||||||||| |||
Sbjct: 52 aagtcgtggtggcctgaaggttaaagg-ccgcccatca--cgtgagggcgcgggtt-gaa 107
Query: 1239 acctggcaagtaccaatgtgat-ttttcatagtcatacgtactttctaatagtatttaga 1297
|||||||||||||||||||||| ||||| ||||| | ||||||||||| ||||||||||
Sbjct: 108 acctggcaagtaccaatgtgatcttttccgagtcacatgtactttctaacagtatttaga 167
Query: 1298 caccactgacgaacggtgaaggaaaacatcgtgaggaaacctggacttataatttcaaat 1357
||||||||||| ||||||||||| ||| |||||||||||||||| |||||||||||||||
Sbjct: 168 caccactgacggacggtgaaggagaacgtcgtgaggaaacctggtcttataatttcaaat 227
Query: 1358 tataagtttgaaatcgccaacccgtcttgagcaagcgtgg 1397
||||||||||||||| |||| | | ||||||| |||||||
Sbjct: 228 tataagtttgaaatcaccaatcagccttgagcgagcgtgg 267
>BF01052B1H02
Length = 790
Score = 206 bits (104), Expect = 7e-53
Identities = 190/218 (87%), Gaps = 3/218 (1%)
Strand = Plus / Minus
Query: 1183 cgtggtggcctggaggttaaaggaccgcctctcatgcgtgagggcgcgggttcgaaacct 1242
||||||||||| ||||||||||| ||||||||| | | |||||| || |||||||| |||
Sbjct: 561 cgtggtggcctagaggttaaaggcccgcctctcgtacatgagggtgcaggttcgaatcct 502
Query: 1243 ggcaagtaccaatgtgatttttcat---agtcatacgtactttctaatagtatttagaca 1299
|| |||||| |||||||| ||| | | | ||| | ||||| ||| ||||||||||||
Sbjct: 501 gggaagtactaatgtgatctttttttcgaatgatatgcactttttaagagtatttagaca 442
Query: 1300 ccactgacgaacggtgaaggaaaacatcgtgaggaaacctggacttataatttcaaatta 1359
| ||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| |
Sbjct: 441 ctactgacggacggtgaaggaaaacatcgtgaggaaacctggtcttataatttgaaataa 382
Query: 1360 taagtttgaaatcgccaacccgtcttgagcaagcgtgg 1397
| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagtttgaaatcgccaacccgtcttgagcaagcgtgg 344
>BF01037B1H08
Length = 758
Score = 186 bits (94), Expect = 6e-47
Identities = 140/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 1179 aagtcgtggtggcctggaggttaaaggaccgcctctcatgcgtgagggcgcgggttcgaa 1238
||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 69 aagtcgttgtggcctggaggttaaaggcccgcctctcatacgtgaaggcgcgggttcgaa 128
Query: 1239 acctggcaagtaccaatgtgat-ttttcatagtcatacgtactttctaatagtatttaga 1297
|||||||||||||||||||||| ||||| ||||||| ||||||||||| | |||||||
Sbjct: 129 acctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagaatatttagt 188
Query: 1298 caccactgacgaacggtgaaggaaaacatcgtga 1331
||||||||||| ||||||| |||||||||||||
Sbjct: 189 caccactgacggacggtgagtgaaaacatcgtga 222
>BF01029B2F12
Length = 749
Score = 182 bits (92), Expect = 1e-45
Identities = 149/169 (88%)
Strand = Plus / Minus
Query: 1181 gtcgtggtggcctggaggttaaaggaccgcctctcatgcgtgagggcgcgggttcgaaac 1240
||||||||||||| |||| |||| | ||| || | || ||||||||||||||||||||
Sbjct: 711 gtcgtggtggcctagaggctaaaagcccgnctnncgtgtatgagggcgcgggttcgaaac 652
Query: 1241 ctggcaagtaccaatgtgatttttcatagtcatacgtactttctaatagtatttagacac 1300
|||||||||||||||||||||| | | || |||| ||||||||||| |||||||||||||
Sbjct: 651 ctggcaagtaccaatgtgatttatgagagacatatgtactttctaagagtatttagacac 592
Query: 1301 cactgacgaacggtgaaggaaaacatcgtgaggaaacctggacttataa 1349
|||||||| |||||||||||| |||||| |||||||||||| |||||||
Sbjct: 591 cactgacggacggtgaaggaagacatcgcgaggaaacctggtcttataa 543
>BF01010B2F09
Length = 764
Score = 151 bits (76), Expect = 4e-36
Identities = 182/213 (85%), Gaps = 7/213 (3%)
Strand = Plus / Minus
Query: 1187 gtggcctggaggttaaaggaccgcctctcatgcgtgagggcgcgggttcgaaacctggca 1246
|||| |||||||||||||| | |||||||| ||||| | ||||||||||||||||| ||
Sbjct: 544 gtgggctggaggttaaaggccagcctctcacacgtgaagtcgcgggttcgaaacctgaca 485
Query: 1247 agtaccaatgtgatttttcat--agtcatacgtactttctaatagtatttagacaccact 1304
||||||||||||| | ||||| ||||||| ||||||||||| ||||||||||| |||||
Sbjct: 484 agtaccaatgtga-tcttcatcgagtcatatgtactttctaagagtatttagacgccact 426
Query: 1305 gacgaacggtgaaggaaaacatcgtgaggaaacctggacttataatttcaaattataagt 1364
|||| ||||||||||| || | |||||||||||||| || ||| | |||||||||
Sbjct: 425 gacggacggtgaaggagaata---tgaggaaacctggatttgtaa-taaaaattataaaa 370
Query: 1365 ttgaaatcgccaacccgtcttgagcaagcgtgg 1397
|| |||||||||| ||||||||||| |||||||
Sbjct: 369 ttaaaatcgccaatccgtcttgagcgagcgtgg 337
>BF01031B1E12
Length = 730
Score = 115 bits (58), Expect = 2e-25
Identities = 95/106 (89%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 1293 ttagacaccactgacgaacggtgaaggaaaacatcgtgaggaaacctggacttataattt 1352
|||| ||||||||| ||||||| |||||||||||||||||||||||| ||||| |||
Sbjct: 36 ttaggcaccactgagagacggtgagggaaaacatcgtgaggaaacctggtcttatgatta 95
Query: 1353 -caaattataagtttgaaatcgccaacccgtcttgagcaagcgtgg 1397
|||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 96 gcaaagtataagattgaaatcgccaacccgtcttgagcaagcgtgg 141
>BF01040A1G09
Length = 753
Score = 97.6 bits (49), Expect = 5e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 1348 aatttcaaattataagtttgaaatcgccaacccgtcttgagcaagcgtggcga 1400
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 10 aatttcaaattataagtttgaaatcgccaacccatcttgagcaagcgtggcga 62
>BF01062A1B01
Length = 807
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 1313 gtgaaggaaaacatcgtgaggaaacctggacttataatttcaaattataagtttgaaatc 1372
||||||| |||||||| |||||||||||||||| |||||| |||||| ||||||| ||||
Sbjct: 230 gtgaagggaaacatcgcgaggaaacctggacttgtaatttaaaattagaagtttggaatc 171
Query: 1373 gccaacccgtcttgagc 1389
||||| ||| |||||||
Sbjct: 170 gccaatccgccttgagc 154
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 186,067
Number of extensions: 4072
Number of successful extensions: 4072
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 4060
Number of HSP's successfully gapped: 10
Length of query: 1400
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1383
Effective length of database: 8,119,229
Effective search space: 11228893707
Effective search space used: 11228893707
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)