BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11188 (UTR included)
(2665 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A2G03 1312 0.0
>BF01053A2G03
Length = 788
Score = 1312 bits (662), Expect = 0.0
Identities = 682/686 (99%), Gaps = 2/686 (0%)
Strand = Plus / Plus
Query: 1982 accggacatcatactcacagattactcgggcgagttagacccgggtatattcggcggcga 2041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 accggacatcatactcacagattactcgggcgagttagacccgggtatattcggcggcga 67
Query: 2042 ggaggctcagctgagggctgggttggatctggacgacttgacgttgctggaggaaccgag 2101
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 68 ggaggctcagctgagggctgggttggatctggacgacctgacgttgctggaggaaccgag 127
Query: 2102 ctcgttactcccggactcgtccgtggaacacgagttccgcctcgaccgcctcgaccgttt 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ctcgttactcccggactcgtccgtggaacacgagttccgcctcgaccgcctcgaccgttt 187
Query: 2162 gtagtaccgaggcgatcctctcagaggccagaggcgaggcagaggtgagctcgactccct 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gtagtaccgaggcgatcctctcagaggccagaggcgaggcagaggtgagctcgactccct 247
Query: 2222 atacttcatgacaattcgtttcaagtctgagctagtgattataccgtgtcgccgcccgtt 2281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atacttcatgacaattcgtttcaagtctgagctagtgattataccgtgtcgccgcccgtt 307
Query: 2282 tctatgttagcgacggcgacgctaacgacacacattcccagcgtgtgagtgagcgctcca 2341
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tgtatgttagcgacggcgacgctaacgacacacattcccagcgtgtgagtgagcgctcca 367
Query: 2342 cggacgatgtaacgttgcgagtgctggtgttcattgtggttttaaatgttttactcatg- 2400
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cggacgatgtaacgttgcgagtgctggtgttcattgtggttttaaatgttttactcatgt 427
Query: 2401 tttttttttcaactcggtggcataggtacgtttagatttagatttttctatacatagtct 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tttttttttcaactcggtggcataggtacgtttagatttagatttttctatacatagtct 487
Query: 2461 acgataagtctatcgaaaatccttgtacagagttatatatatattttttaatattaagta 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 acgataagtctatcgaaaatccttgtacagagttatatatatattttttaatattaagta 547
Query: 2521 ttgtaaatatgtactcgaatatcattaga-ttttttttatatatatttttctgattcgat 2579
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 548 ttgtaaatatgtactcgaatatcattagatttttttttatatatatttttctgattcgat 607
Query: 2580 agtttaattctatacgagaccgagtcggttgtattgtaaataaaactctaaagtgttcac 2639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 agtttaattctatacgagaccgagtcggttgtattgtaaataaaactctaaagtgttcac 667
Query: 2640 gttataaggtcgcatttaaaacgcta 2665
||||||||||||||||||||||||||
Sbjct: 668 gttataaggtcgcatttaaaacgcta 693
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 337,645
Number of extensions: 8923
Number of successful extensions: 8923
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8915
Number of HSP's successfully gapped: 1
Length of query: 2665
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2648
Effective length of database: 8,119,229
Effective search space: 21499718392
Effective search space used: 21499718392
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)