BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08018 (UTR included)
(5020 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B2C03 1061 0.0
>BF01039B2C03
Length = 751
Score = 1061 bits (535), Expect = 0.0
Identities = 547/551 (99%)
Strand = Plus / Plus
Query: 3498 gcggtgtcggcaagatggtcggctctaagggctgctgcgatacgtcgcggaggcgctcgc 3557
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcggtgtcggctagatggtcggctctaagggctgctgcgatacgtcgcggaggcgctcgc 260
Query: 3558 cgcttacgtcgcgagattggagccctaaaagagactttggacgacatatgcgagccggga 3617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgcttacgtcgcgagattggagccctaaaagagactttggacgacatatgcgagccggga 320
Query: 3618 gactatgccccccaaccgcatacacgcgcacaactacataagagaattgaggaattgaag 3677
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactatgccccccagccgcatacacgcgcacaactacataagagaattgaggaattgaag 380
Query: 3678 gaacgtctatcgcgtctgctagaatgtaaagtctccatgttgaagctgacagtgtcagtc 3737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaacgtctatcgcgtctgctagaatgtaaagtctccatgttgaagctgacagtgtcagtc 440
Query: 3738 aggagagctcttggtgagatggagacagatgatagcggattgacgactgaattgacttcc 3797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggagagctcttggtgagatggagacagatgatagcggattgacgactgaattgacttcc 500
Query: 3798 ttgatagctgcatgggatgacgcccatcaacgaacttcaacggagttactgtcattggag 3857
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgatcgctgcatgggatgacgcccatcaacgaacttcaacggagttactgtcattggag 560
Query: 3858 aaggcggtgtcagcttgggctgaatgggagcgtgcgctgcgcgaactgcaggcagcactg 3917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggcggtgtcagcttgggctgaatgggagcgtgcgctgcgcgaactgcaggcagcactg 620
Query: 3918 cgtggagacctggcagctttagaagcgctgcgtgatcgacccgattgtgatgaactcgcc 3977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgtggagacctggcagctttagaagcgctgcgtgatcgacccgattgtgatgaactcgcc 680
Query: 3978 tcccacgttagacatctagccgctgcactgtttgataagaaaaagggcggttccacgtgt 4037
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 tcccacgttagacatctagccgctgcactgtttgataagaaaaagggtggttccacgtgt 740
Query: 4038 gactctctatc 4048
|||||||||||
Sbjct: 741 gactctctatc 751
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 426,961
Number of extensions: 7101
Number of successful extensions: 7101
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7101
Number of HSP's successfully gapped: 1
Length of query: 5020
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5002
Effective length of database: 8,109,745
Effective search space: 40564944490
Effective search space used: 40564944490
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)