BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10653 (UTR included)
(6460 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A1C03 1340 0.0
BF01040A1A06 1191 0.0
>BF01031A1C03
Length = 692
Score = 1340 bits (676), Expect = 0.0
Identities = 679/680 (99%)
Strand = Plus / Plus
Query: 5012 tgataacgaccaggtggctttatcgtttatttttgagaatctcttaacaacgaaacttaa 5071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tgataacgaccaggtggctttatcgtttatttttgagaatctcttaacaacgaaacttaa 72
Query: 5072 agttatgccggaagcttggccattcctgaaaccagttaacaagaaacaggtcaaagatta 5131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 agttatgccggaagcttggccattcctgaaaccagttaacaagaaacaggtcaaagatta 132
Query: 5132 ctataatgttattaaaaaaccaatcgacatggagacgataggaaagaaaatacaagctca 5191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ctataatgttattaaaaaaccaatcgacatggagacgataggaaagaaaatacaagctca 192
Query: 5192 taagtaccacagtcgggaggaatttcttcgggatatacagttgttggtggataactgtcg 5251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 taagtaccacagtcgggaggaatttcttcgggatatacagttgttggtggataactgtcg 252
Query: 5252 tgcttacaacggacttaactcacagttcacgagacaggccgaggccgtactcaaagtaac 5311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgcttacaacggacttaactcacagttcacgagacaggccgaggccgtactcaaagtaac 312
Query: 5312 ccaagaagccctagaacagttcgatgagcacgtgagtcagctggaggcgaatatagcacg 5371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccaagaagccctagaacagttcgatgagcacgtgagtcagctggaggcgaatatagcacg 372
Query: 5372 cgttcagcaaaagatgttagaggatgctgagcagtctgagttagaagatgacccgccgcc 5431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cgttcagcaaaagatgttagaggatgctgagcagtctgagttagaagatgacccgccgcc 432
Query: 5432 gcccagcgacgagaaaagaggccgcggaagaccgaagaaacacaaaccaagcacatcaac 5491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcccagcgacgagaaaagaggccgcggaagaccgaagaaacacaaaccaagcacatcaac 492
Query: 5492 atcgatggcagatgatgccacacagaggaaacgtagtcgtgtcaagaaggaccaaaatag 5551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atcgatggcagatgatgccacacagaggaaacgtagtcgtgtcaagaaggaccaaaatag 552
Query: 5552 tctggttgatgatttacaatattctgacagtggaaattcaggtctagaggaagtcgaaca 5611
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 553 tctggttgatgatttacaatattctgacagtggaagttcaggtctagaggaagtcgaaca 612
Query: 5612 aaaagatgcagctgaagctatggtacaattatctgttcgacctgatgacgacattcctga 5671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aaaagatgcagctgaagctatggtacaattatctgttcgacctgatgacgacattcctga 672
Query: 5672 ttcgagcttcgatacttctg 5691
||||||||||||||||||||
Sbjct: 673 ttcgagcttcgatacttctg 692
>BF01040A1A06
Length = 605
Score = 1191 bits (601), Expect = 0.0
Identities = 604/605 (99%)
Strand = Plus / Plus
Query: 4211 gaacatgtcgaccatgtctgacctagggtccaaatcacctggcctgatcccattgggtca 4270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaacatgtcgaccatgtctgacctagggtccaaatcacctggcctgatcccattgggtca 60
Query: 4271 gatcaaacaggaaccggatcttcacacaccatctagacgacgggccaaattgaagcccga 4330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcaaacaggaaccggatcttcacacaccatctagacgacgggccaaattgaagcccga 120
Query: 4331 tttgaaattaaagtgcggagcgtgcggtcaagttggtcacatgcgtacaaacaaggcgtg 4390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttgaaattaaagtgcggagcgtgcggtcaagttggtcacatgcgtacaaacaaggcgtg 180
Query: 4391 tccgttatacacagggggcggggcggtgacccccgaacatgatgaaccagcccccgaacc 4450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccgttatacacagggggcggggcggtgacccccgaacatgatgaaccagcccccgaacc 240
Query: 4451 tgacgaccttgaccttggatatgtggatggaaccaagctcacactaccttctaaatttgt 4510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgacgaccttgaccttggatatgtggatggaaccaagctcacactaccttctaaatttgt 300
Query: 4511 taagcaatcttcggaggagcttcgtcgtcgtagcggcagtcgtcgcgaggtccgagctgc 4570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taagcaatcttcggaggagcttcgtcgtcgtagcggcagtcgtcgcgaggtccgagctgc 360
Query: 4571 tgggcgaaccaagagacgcggcactgccagtgattcttgtgattatctcgtcaaaagacc 4630
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 361 tgggcgaaccaagagacgcggcactgccagcgattcttgtgattatctcgtcaaaagacc 420
Query: 4631 agcggaaagacgcagaactgatccactagtgactctctcgtccctattagaagacgtatt 4690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agcggaaagacgcagaactgatccactagtgactctctcgtccctattagaagacgtatt 480
Query: 4691 gaacactatgagacacctccccgatgtacaacccttcctgttcccagtcaatccgaagct 4750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaacactatgagacacctccccgatgtacaacccttcctgttcccagtcaatccgaagct 540
Query: 4751 ggtagcggattactatcgtatcgtatcgcggccgatggatctacagactataagggacaa 4810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtagcggattactatcgtatcgtatcgcggccgatggatctacagactataagggacaa 600
Query: 4811 tttga 4815
|||||
Sbjct: 601 tttga 605
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 113,689
Number of extensions: 14713
Number of successful extensions: 14713
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 14713
Number of HSP's successfully gapped: 2
Length of query: 6460
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6442
Effective length of database: 8,109,745
Effective search space: 52242977290
Effective search space used: 52242977290
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)