BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16968 (UTR included)
(2479 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A1D10 1568 0.0
>BF01051A1D10
Length = 813
Score = 1568 bits (791), Expect = 0.0
Identities = 800/803 (99%)
Strand = Plus / Plus
Query: 1610 tggtatgagcggaatgtcaatgggcggtccaggtggtcagggacccatggggcagaatat 1669
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 11 tggtatgagcggaatgtcaatgggtggtccaggtggtcagggacccatggggcagaatat 70
Query: 1670 gggaatgtttggaccaaaacctatgccagtgagtgcagggaaagtgtacccaccagacca 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gggaatgtttggaccaaaacctatgccagtgagtgcagggaaagtgtacccaccagacca 130
Query: 1730 acctatggtgttcaatcctcaaaaccctaatgctccacccatttatccctgtggagtgtg 1789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 acctatggtgttcaatcctcaaaaccctaatgctccacccatttatccctgtggagtgtg 190
Query: 1790 tcacaaggaagtccatgataatgatcaagctattttatgtgaatcaggctgcaacttttg 1849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcacaaggaagtccatgataatgatcaagctattttatgtgaatcaggctgcaacttttg 250
Query: 1850 gttccacagaggatgcaccgggctgacagagccagcttttcagttgttaacagcggaagt 1909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gttccacagaggatgcaccgggctgacagagccagcttttcagttgttaacagcggaagt 310
Query: 1910 atacgctgaatgggtgtgtgacaagtgcctacattctaaaaacataccactggtgaaatt 1969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atacgctgaatgggtgtgtgacaagtgcctacattctaaaaacataccactggtgaaatt 370
Query: 1970 caaaccttaacaatgatacccgtttgccgagagctcatctacaatcatcacatatttatt 2029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 caaaccttaacaatgatacccgtttgccgagagctcatctacaatcatcacatatttatt 430
Query: 2030 tcacttcattatggacttttcaaataatttattgaattacggaatggagtcaaagtatga 2089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcacttcattatggacttttcaaataatttattgaattacggaatggagtcaaagtatga 490
Query: 2090 aggatctcatgggtaggattttagtaatttttgaatggtttccttaaattatattgaacg 2149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aggatctcatgggtaggattttagtaatttttgaatggtttccttaaattatattgaacg 550
Query: 2150 gataataaagtcggaatcaatgtttttatatattacctatatttataacgtgtttgaaat 2209
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 551 gataataaagtcggaatcaatgtttttatatattacctatatttataatgtgtttgaaat 610
Query: 2210 aaaaacagtgaacagtcattattattaattttgttgctaattcattgatggggatgttga 2269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aaaaacagtgaacagtcattattattaattttgttgctaattcattgatggggatgttga 670
Query: 2270 atttctaacttaatttttgtcattatcatgggatgagtttaagtttcgattttttcaaat 2329
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atttctaacttaattattgtcattatcatgggatgagtttaagtttcgattttttcaaat 730
Query: 2330 aattttctgttctgttgttttaaatacatatccgaatgagcaattgtatgtgattctatc 2389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aattttctgttctgttgttttaaatacatatccgaatgagcaattgtatgtgattctatc 790
Query: 2390 aaatttgtattacatgcagcttt 2412
|||||||||||||||||||||||
Sbjct: 791 aaatttgtattacatgcagcttt 813
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 249,490
Number of extensions: 4621
Number of successful extensions: 4621
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4619
Number of HSP's successfully gapped: 1
Length of query: 2479
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2462
Effective length of database: 8,119,229
Effective search space: 19989541798
Effective search space used: 19989541798
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)