BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN17427 (UTR included)
         (3230 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_2089_C1                                                          391   e-108

>BF14_2089_C1
          Length = 882

 Score =  391 bits (197), Expect = e-108
 Identities = 203/205 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2939 aggagactcacgcagaaccccaactactacaacctgcagggggtcacgcacagacatctc 2998
            ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1    aggagactctcgcagaaccccaactactacaacctgcagggggtcacacacagacatctc 60

                                                                        
Query: 2999 tccgatcacctgtcagagctggtcgagtcaaccctatcagatctggaacagtcgaagtgt 3058
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tccgatcacctgtcagagctggtcgagtcaaccctatcagatctggaacagtcgaagtgt 120

                                                                        
Query: 3059 atagccatcgaggatgatatggacctgcagcctctcaaccttggaatgatagcctcctac 3118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  atagccatcgaggatgatatggacctgcagcctctcaaccttggaatgatagcctcctac 180

                                     
Query: 3119 tactacataaactacactactatag 3143
            |||||||||||||||||||||||||
Sbjct: 181  tactacataaactacactactatag 205


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,213
Number of extensions: 3279
Number of successful extensions: 3279
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3279
Number of HSP's successfully gapped: 1
Length of query: 3230
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3212
Effective length of database: 8,109,745
Effective search space: 26048500940
Effective search space used: 26048500940
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)