BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07369 (UTR included)
(1582 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2223_C1 783 0.0
>BF14_2223_C1
Length = 833
Score = 783 bits (395), Expect = 0.0
Identities = 398/399 (99%)
Strand = Plus / Plus
Query: 546 agattcggcgtgaacgatgactgccaggagagtgtggagagatgctgcaagaaatccaag 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agattcggcgtgaacgatgactgccaggagagtgtggagagatgctgcaagaaatccaag 405
Query: 606 ccttacgtggagccgacgacccccgcacccccgacggagaggggctgcgggtaccggaac 665
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 406 ccttacgtggagccgacgacccccgcacccccaacggagaggggctgcgggtaccggaac 465
Query: 666 ccccacggcatcggcttcacaataaccggcgggaatggtgacgaggcccagttcggcgag 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ccccacggcatcggcttcacaataaccggcgggaatggtgacgaggcccagttcggcgag 525
Query: 726 ttcccgtgggtggtggccttgctggacgccgctaacggcagctacgtgggggtcggggtg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttcccgtgggtggtggccttgctggacgccgctaacggcagctacgtgggggtcggggtg 585
Query: 786 ctcgtccaccccctcgcggtgatgacgggggcgcacgtggtgtacaaatacccggccggc 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctcgtccaccccctcgcggtgatgacgggggcgcacgtggtgtacaaatacccggccggc 645
Query: 846 gggttaatagctcgggccggtgagtgggatacgcagaccacaaaagagcccctcaagtcg 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gggttaatagctcgggccggtgagtgggatacgcagaccacaaaagagcccctcaagtcg 705
Query: 906 caggagcgagtcgtggaagacattgttataaaggaaggt 944
|||||||||||||||||||||||||||||||||||||||
Sbjct: 706 caggagcgagtcgtggaagacattgttataaaggaaggt 744
Score = 153 bits (77), Expect = 1e-36
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 1409 accctaagactctccataacgacatggccctcctccggctccagcgacccctggagctgg 1468
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 749 accctaagactctccgtaacgacatggccctcctccggctccagcgatccctggagctgg 808
Query: 1469 cggctcacatcaacgtcatctgtct 1493
|||||||||||||||||||||||||
Sbjct: 809 cggctcacatcaacgtcatctgtct 833
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,944
Number of extensions: 22497
Number of successful extensions: 22497
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22497
Number of HSP's successfully gapped: 2
Length of query: 1582
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1565
Effective length of database: 8,119,229
Effective search space: 12706593385
Effective search space used: 12706593385
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)