BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00783 (UTR included)
(946 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A1H01 632 0.0
>BF01009A1H01
Length = 391
Score = 632 bits (319), Expect = 0.0
Identities = 328/331 (99%)
Strand = Plus / Plus
Query: 297 cgccgcgaagagagattcagacagacatcagaaagcacacatcaaagagtattatggtgg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 cgccgcgaagagagattcagacagacatcagaaagcacacatcaaagagtattatggtgg 92
Query: 357 agtttgatgcagactggagtcctcgtcgggatcggttactggcagatgagacatctcaag 416
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 93 agtttgatgcagacgggagtcctcgtcgggatcggttattggcagatgagacatctcaag 152
Query: 417 agtttctttgaggctaagaaattagtttaaataaaagccactatatatcatagtcataca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 agtttctttgaggctaagaaattagtttaaataaaagccactatatatcatagtcataca 212
Query: 477 tttttctctatttataataataaaaaaatttataacttcagtttctaagattacaattgt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tttttctctatttataataataaaaaaatttataacttcagtttctaagattacaattgt 272
Query: 537 cccacatttttgttctgatctgatgtttttcaataaaatgtgattgtaattccgttatat 596
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cacacatttttgttctgatctgatgtttttcaataaaatgtgattgtaattccgttatat 332
Query: 597 tttatatgaatgaataaaatgaccatggtaa 627
|||||||||||||||||||||||||||||||
Sbjct: 333 tttatatgaatgaataaaatgaccatggtaa 363
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 152,454
Number of extensions: 3479
Number of successful extensions: 3479
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3479
Number of HSP's successfully gapped: 1
Length of query: 946
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 929
Effective length of database: 8,119,229
Effective search space: 7542763741
Effective search space used: 7542763741
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)