BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10294 (UTR included)
(1231 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A1G07 1009 0.0
BF14_853_C1 100 1e-20
>BF01039A1G07
Length = 762
Score = 1009 bits (509), Expect = 0.0
Identities = 518/521 (99%)
Strand = Plus / Minus
Query: 566 ggcgtgctacgacaactactgcgactattataaatgcacccgtcttttgggcgatgtaga 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ggcgtgctacgacaactactgcgactattataaatgcacccgtcttttgggcgatgtaga 563
Query: 626 cgattgcaagatattcaaaagatacttccagactatctgccccaacttttggatcgaaca 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cgattgcaagatattcaaaagatacttccagactatctgccccaacttttggatcgaaca 503
Query: 686 ctgggatgaactccgggagaaaggggctttccctggacccatttaacactttaattttca 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctgggatgaactccgggagaaaggggctttccctggacccatttaacactttaattttca 443
Query: 746 ttaaaaagctcttttaattatctatttgtttatttacttttctcaacgttggctatcata 805
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 442 ttaaaaagctcttttaattatctatttgtttatttacttttctcaacgttagctatcata 383
Query: 806 gccgtaaacaataatggaaataaaacataattaaatgtaactcatttaatctatatcacg 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gccgtaaacaataatggaaataaaacataattaaatgtaactcatttaatctatatcacg 323
Query: 866 tctatctgaaataagaattataaataaacatagctaagccagcaccctctagatcctgcc 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tctatctgaaataagaattataaataaacatagctaagccagcaccctctagatcctgcc 263
Query: 926 ggggaacgtgccctcggagcgctgggtgtcccatttatcaacccattcattggggcagag 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggggaacgtgccctcggagcgctgggtgtcccatttatcaacccattcattggggcagag 203
Query: 986 tgatttgtacacacgcatgaagtagttgcagggttcgtatttttcgccgcgaaccttctg 1045
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 202 tgatttgtacacacgcatgaagtagttgcagggttcgtatttttcgccgcggaccttctg 143
Query: 1046 gcatcggtggaagtccaggtagctctggtagcagtgccttg 1086
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 142 gcaccggtggaagtccaggtagctctggtagcagtgccttg 102
>BF14_853_C1
Length = 906
Score = 99.6 bits (50), Expect = 1e-20
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 1 agaaaaataaacttttacctagaatgtatttccgaattataaagtgacgtggcg 54
|||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 853 agaaaaataaacttttacctagaatgtacttccgaattataaagtgacgtggcg 906
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,365
Number of extensions: 14415
Number of successful extensions: 14415
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 14415
Number of HSP's successfully gapped: 2
Length of query: 1231
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1214
Effective length of database: 8,119,229
Effective search space: 9856744006
Effective search space used: 9856744006
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)